Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.32□□□□□ -1.88
RFC4P35249 RNA5SP320-201ENST00000516263 124 ntBASIC3.32□□□□□ -1.88
RFC4P35249 RNU6-467P-201ENST00000517027 110 ntBASIC3.32□□□□□ -1.88
RFC4P35249 MTND1P36-201ENST00000522384 936 ntBASIC3.32□□□□□ -1.88
RFC4P35249 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.32□□□□□ -1.88
RFC4P35249 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.32□□□□□ -1.88
RFC4P35249 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
RFC4P35249 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.32□□□□□ -1.88
RFC4P35249 AC133794.1-201ENST00000602731 914 ntBASIC3.32□□□□□ -1.88
RFC4P35249 XIAPP1-201ENST00000603162 600 ntBASIC3.32□□□□□ -1.88
RFC4P35249 U4.3-201ENST00000621047 82 ntBASIC3.32□□□□□ -1.88
RFC4P35249 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.32□□□□□ -1.88
RFC4P35249 AC108206.1-201ENST00000570186 4159 ntBASIC3.32□□□□□ -1.88
RFC4P35249 AP002907.1-201ENST00000606361 1430 ntBASIC3.32□□□□□ -1.88
RFC4P35249 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.32□□□□□ -1.88
RFC4P35249 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC4P35249 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RFC4P35249 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC4P35249 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RFC4P35249 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC4P35249 RNU6-441P-201ENST00000384545 106 ntBASIC3.31□□□□□ -1.88
RFC4P35249 MIR27B-201ENST00000385129 97 ntBASIC3.31□□□□□ -1.88
RFC4P35249 RNA5SP425-201ENST00000410336 112 ntBASIC3.31□□□□□ -1.88
RFC4P35249 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC4P35249 MTATP6P4-201ENST00000427725 675 ntBASIC3.31□□□□□ -1.88
RFC4P35249 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
RFC4P35249 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 OR51B8P-201ENST00000449892 769 ntBASIC3.31□□□□□ -1.88
RFC4P35249 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.31□□□□□ -1.88
RFC4P35249 OR6K1P-201ENST00000456766 971 ntBASIC3.31□□□□□ -1.88
RFC4P35249 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
RFC4P35249 HMGB1P25-201ENST00000468402 607 ntBASIC3.31□□□□□ -1.88
RFC4P35249 AC092902.1-201ENST00000486999 259 ntBASIC3.31□□□□□ -1.88
RFC4P35249 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 SNORA31.1-201ENST00000515993 133 ntBASIC3.31□□□□□ -1.88
RFC4P35249 SNORA31.5-201ENST00000516190 133 ntBASIC3.31□□□□□ -1.88
RFC4P35249 HIGD1AP6-201ENST00000521833 279 ntBASIC3.31□□□□□ -1.88
RFC4P35249 AP001804.3-201ENST00000525146 880 ntBASIC3.31□□□□□ -1.88
RFC4P35249 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
RFC4P35249 AC092451.2-201ENST00000538746 658 ntBASIC3.31□□□□□ -1.88
RFC4P35249 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC4P35249 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC4P35249 AC120053.1-201ENST00000607706 736 ntBASIC3.31□□□□□ -1.88
RFC4P35249 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC4P35249 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
RFC4P35249 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC4P35249 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
RFC4P35249 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC4P35249 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.31□□□□□ -1.88
RFC4P35249 MTND5P27-201ENST00000428871 1720 ntBASIC3.3□□□□□ -1.88
RFC4P35249 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC4P35249 AC092435.3-201ENST00000565538 3654 ntBASIC3.3□□□□□ -1.88
RFC4P35249 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFC4P35249 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC4P35249 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
RFC4P35249 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC4P35249 MTCYBP34-201ENST00000439552 670 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AL592437.1-201ENST00000443781 492 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AC004022.1-201ENST00000447766 1066 ntBASIC3.3□□□□□ -1.88
RFC4P35249 CDC42P1-201ENST00000456658 548 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
RFC4P35249 RPS26P21-201ENST00000475397 348 ntBASIC3.3□□□□□ -1.88
RFC4P35249 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFC4P35249 SRIP1-201ENST00000489235 288 ntBASIC3.3□□□□□ -1.88
RFC4P35249 KCTD9P5-201ENST00000504141 1170 ntBASIC3.3□□□□□ -1.88
RFC4P35249 RN7SKP24-201ENST00000515888 284 ntBASIC3.3□□□□□ -1.88
RFC4P35249 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
RFC4P35249 HMGB1P1-201ENST00000522557 636 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AC124293.1-201ENST00000530034 493 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC4P35249 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC4P35249 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.3□□□□□ -1.88
RFC4P35249 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC4P35249 AC090116.1-201ENST00000615679 446 ntBASIC3.3□□□□□ -1.88
RFC4P35249 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AL360181.4-201ENST00000621752 134 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AC068880.4-201ENST00000623082 495 ntBASIC3.3□□□□□ -1.88
RFC4P35249 AL121594.5-201ENST00000631724 573 ntBASIC3.3□□□□□ -1.88
RFC4P35249 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RFC4P35249 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RFC4P35249 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
RFC4P35249 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC4P35249 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFC4P35249 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFC4P35249 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
RFC4P35249 RNU6-353P-201ENST00000364266 108 ntBASIC3.29□□□□□ -1.88
RFC4P35249 SNORD114-30-201ENST00000364448 72 ntBASIC3.29□□□□□ -1.88
RFC4P35249 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFC4P35249 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RFC4P35249 RNU6-207P-201ENST00000384137 107 ntBASIC3.29□□□□□ -1.88
RFC4P35249 RNU6-821P-201ENST00000390995 107 ntBASIC3.29□□□□□ -1.88
RFC4P35249 RNU6-932P-201ENST00000391108 106 ntBASIC3.29□□□□□ -1.88
RFC4P35249 TAF13P2-201ENST00000416876 286 ntBASIC3.29□□□□□ -1.88
RFC4P35249 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.29□□□□□ -1.88
RFC4P35249 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms