Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
USP6P35125 Z77249.1-201ENST00000444622 1175 ntBASIC3.36□□□□□ -1.87
USP6P35125 HIGD1AP2-201ENST00000446367 280 ntBASIC3.36□□□□□ -1.87
USP6P35125 HMGN3P1-201ENST00000453847 193 ntBASIC3.36□□□□□ -1.87
USP6P35125 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 AC087879.1-201ENST00000474343 374 ntBASIC3.36□□□□□ -1.87
USP6P35125 GAPDHP39-201ENST00000481866 979 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC103975.1-201ENST00000482506 483 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.36□□□□□ -1.87
USP6P35125 AC005921.1-201ENST00000510589 286 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC123904.3-201ENST00000547218 814 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.36□□□□□ -1.87
USP6P35125 MIR4496-201ENST00000635896 61 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC068620.4-201ENST00000636730 1182 ntBASIC3.36□□□□□ -1.87
USP6P35125 MTND5P31-201ENST00000419366 1374 ntBASIC3.36□□□□□ -1.87
USP6P35125 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
USP6P35125 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP6P35125 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP6P35125 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
USP6P35125 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP6P35125 RNU6-582P-201ENST00000362989 107 ntBASIC3.36□□□□□ -1.87
USP6P35125 AL133412.1-201ENST00000380194 2992 ntBASIC3.36□□□□□ -1.87
USP6P35125 SNORD116-23-201ENST00000384645 92 ntBASIC3.36□□□□□ -1.87
USP6P35125 MTCO3P31-201ENST00000405526 789 ntBASIC3.36□□□□□ -1.87
USP6P35125 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 OR51AB1P-201ENST00000429046 620 ntBASIC3.36□□□□□ -1.87
USP6P35125 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.36□□□□□ -1.87
USP6P35125 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.36□□□□□ -1.87
USP6P35125 COX6CP18-201ENST00000448769 222 ntBASIC3.36□□□□□ -1.87
USP6P35125 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 RPL23AP45-201ENST00000476406 468 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 AC119751.4-201ENST00000507498 357 ntBASIC3.36□□□□□ -1.87
USP6P35125 RNU6-548P-201ENST00000517083 115 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC091163.3-201ENST00000518269 1144 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.36□□□□□ -1.87
USP6P35125 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.36□□□□□ -1.87
USP6P35125 OR8K4P-201ENST00000534608 872 ntBASIC3.36□□□□□ -1.87
USP6P35125 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.36□□□□□ -1.87
USP6P35125 AC009063.1-201ENST00000563342 702 ntBASIC3.36□□□□□ -1.87
USP6P35125 RPL23AP84-201ENST00000571193 464 ntBASIC3.36□□□□□ -1.87
USP6P35125 AC069431.2-201ENST00000604149 1099 ntBASIC3.36□□□□□ -1.87
USP6P35125 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
USP6P35125 AC010608.3-201ENST00000625048 527 ntBASIC3.36□□□□□ -1.87
USP6P35125 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP6P35125 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.35□□□□□ -1.87
USP6P35125 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP6P35125 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP6P35125 RNA5SP456-201ENST00000364002 114 ntBASIC3.35□□□□□ -1.87
USP6P35125 EI24P2-201ENST00000397776 1076 ntBASIC3.35□□□□□ -1.87
USP6P35125 EIF5P1-201ENST00000400019 1231 ntBASIC3.35□□□□□ -1.87
USP6P35125 MTCO1P56-201ENST00000401674 224 ntBASIC3.35□□□□□ -1.87
USP6P35125 BTF3P7-201ENST00000407097 488 ntBASIC3.35□□□□□ -1.87
USP6P35125 RNU4-26P-201ENST00000410270 107 ntBASIC3.35□□□□□ -1.87
USP6P35125 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.35□□□□□ -1.87
USP6P35125 RPL31P45-201ENST00000419532 356 ntBASIC3.35□□□□□ -1.87
USP6P35125 PTP4A1P5-201ENST00000420305 455 ntBASIC3.35□□□□□ -1.87
USP6P35125 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.35□□□□□ -1.87
USP6P35125 AL356320.1-201ENST00000429616 163 ntBASIC3.35□□□□□ -1.87
USP6P35125 RPS26P56-201ENST00000444468 240 ntBASIC3.35□□□□□ -1.87
USP6P35125 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.35□□□□□ -1.87
USP6P35125 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.35□□□□□ -1.87
USP6P35125 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.35□□□□□ -1.87
USP6P35125 AC126182.1-201ENST00000478134 357 ntBASIC3.35□□□□□ -1.87
USP6P35125 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
USP6P35125 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.35□□□□□ -1.87
USP6P35125 AC092436.1-201ENST00000506450 503 ntBASIC3.35□□□□□ -1.87
USP6P35125 RNU6-885P-201ENST00000516607 104 ntBASIC3.35□□□□□ -1.87
USP6P35125 RNA5SP135-201ENST00000517019 125 ntBASIC3.35□□□□□ -1.87
USP6P35125 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.35□□□□□ -1.87
USP6P35125 CKS1BP7-201ENST00000522230 235 ntBASIC3.35□□□□□ -1.87
USP6P35125 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.35□□□□□ -1.87
USP6P35125 DEFB130C-202ENST00000530001 230 ntBASIC3.35□□□□□ -1.87
USP6P35125 LLPHP1-201ENST00000603571 367 ntBASIC3.35□□□□□ -1.87
USP6P35125 AP003973.1-201ENST00000604639 691 ntBASIC3.35□□□□□ -1.87
USP6P35125 AC144521.1-201ENST00000607148 956 ntBASIC3.35□□□□□ -1.87
USP6P35125 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP6P35125 AP003485.1-201ENST00000625093 753 ntBASIC3.35□□□□□ -1.87
USP6P35125 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP6P35125 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
USP6P35125 AC000367.1-201ENST00000452711 1766 ntBASIC3.34□□□□□ -1.87
USP6P35125 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP6P35125 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP6P35125 RNU5E-10P-201ENST00000363506 118 ntBASIC3.34□□□□□ -1.88
USP6P35125 U3.15-201ENST00000365398 212 ntBASIC3.34□□□□□ -1.88
USP6P35125 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
USP6P35125 RNU6-224P-201ENST00000384055 107 ntBASIC3.34□□□□□ -1.88
USP6P35125 RNU6-1226P-201ENST00000384317 107 ntBASIC3.34□□□□□ -1.88
USP6P35125 RNU6-925P-201ENST00000384629 104 ntBASIC3.34□□□□□ -1.88
USP6P35125 MIR217-201ENST00000384817 110 ntBASIC3.34□□□□□ -1.88
USP6P35125 Y_RNA.578-201ENST00000390903 88 ntBASIC3.34□□□□□ -1.88
USP6P35125 RNA5SP210-201ENST00000391034 120 ntBASIC3.34□□□□□ -1.88
USP6P35125 AL449283.1-202ENST00000418249 604 ntBASIC3.34□□□□□ -1.88
USP6P35125 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms