Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNA5SP360-201ENST00000516555 118 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.34□□□□□ -1.71
SLC6A4P31645 AC022616.3-201ENST00000523940 148 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AC011979.2-201ENST00000527568 352 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 PHBP17-201ENST00000528576 541 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AP003385.6-201ENST00000531603 374 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 SETP7-201ENST00000552169 453 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 HNRNPCP4-201ENST00000571636 900 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC6A4P31645 AL451044.1-201ENST00000604867 238 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AL049634.3-201ENST00000604968 457 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AC004908.2-201ENST00000609090 574 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AC093788.1-201ENST00000609356 927 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AL590099.1-201ENST00000615276 138 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AC009033.1-201ENST00000624279 431 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 AC091925.2-201ENST00000625059 256 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 FER-210ENST00000628534 558 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC6A4P31645 CASC19-280ENST00000642102 1351 ntBASIC4.34□□□□□ -1.71
SLC6A4P31645 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC6A4P31645 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC6A4P31645 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC6A4P31645 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 AL592437.2-201ENST00000421655 2434 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
SLC6A4P31645 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 AC027287.1-201ENST00000553115 1453 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 OR5J1P-201ENST00000313544 939 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RNU6-797P-201ENST00000363101 109 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RNU6-169P-201ENST00000365336 107 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RNU6-761P-201ENST00000384148 107 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 MT-TL1-201ENST00000386347 75 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RNA5SP118-201ENST00000410385 109 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 AC127526.1-201ENST00000417526 366 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AL161631.1-201ENST00000417933 486 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 ELOCP18-201ENST00000434209 337 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 TIMM9P1-201ENST00000436122 256 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RPL7P54-201ENST00000438336 674 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 SEPT14P3-201ENST00000439401 183 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AL732372.2-207ENST00000445840 183 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC6A4P31645 AC114755.5-201ENST00000447760 831 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 SEPT14P2-201ENST00000453405 183 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC6A4P31645 UBDP1-202ENST00000457888 382 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RPS29P25-201ENST00000481709 171 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 MTCYBP18-201ENST00000501056 747 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 FTH1P21-201ENST00000512179 511 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.33□□□□□ -1.72
SLC6A4P31645 SEPT14P4-201ENST00000513445 186 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RNU6-410P-201ENST00000517006 107 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RNA5SP337-201ENST00000517007 109 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC6A4P31645 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC6A4P31645 FO082796.1-201ENST00000523795 183 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC6A4P31645 CBX3P5-201ENST00000552017 521 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 OR4T1P-201ENST00000554933 911 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC6A4P31645 HMGB1P6-201ENST00000569046 646 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC022655.2-201ENST00000577280 318 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 COX6CP3-201ENST00000580869 223 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC6A4P31645 AC115621.1-201ENST00000604653 858 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 MIR92B-201ENST00000607575 96 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AL391813.2-201ENST00000609113 322 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC006329.2-201ENST00000611491 394 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC131238.1-201ENST00000617135 328 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 ZYXP1-201ENST00000617638 118 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AL161637.1-201ENST00000622380 412 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AP005264.7-201ENST00000625003 745 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 RNA5SP196-201ENST00000625967 102 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC055839.1-201ENST00000634467 498 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC6A4P31645 AL139811.1-201ENST00000424779 2299 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 AL138713.1-201ENST00000624026 2130 ntBASIC4.33□□□□□ -1.72
SLC6A4P31645 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC6A4P31645 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC6A4P31645 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 AC073544.1-201ENST00000600110 1595 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC6A4P31645 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC6A4P31645 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 RNU6-821P-201ENST00000390995 107 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 MRPL50P2-201ENST00000416821 482 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AL356095.1-201ENST00000417217 199 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AL353193.1-201ENST00000421444 268 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms