Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CD40P25942 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CD40P25942 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CD40P25942 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40P25942 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.27□□□□□ -1.73
CD40P25942 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CD40P25942 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CD40P25942 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.27□□□□□ -1.73
CD40P25942 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 PRO1804-201ENST00000623780 2050 ntBASIC4.27□□□□□ -1.73
CD40P25942 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.27□□□□□ -1.73
CD40P25942 RNU5A-1-201ENST00000362698 116 ntBASIC4.27□□□□□ -1.73
CD40P25942 Y_RNA.58-201ENST00000362807 102 ntBASIC4.27□□□□□ -1.73
CD40P25942 Y_RNA.154-201ENST00000363624 102 ntBASIC4.27□□□□□ -1.73
CD40P25942 RNY3P1-201ENST00000365085 102 ntBASIC4.27□□□□□ -1.73
CD40P25942 RNY3-201ENST00000365484 102 ntBASIC4.27□□□□□ -1.73
CD40P25942 Y_RNA.490-201ENST00000384413 102 ntBASIC4.27□□□□□ -1.73
CD40P25942 Y_RNA.530-201ENST00000384587 101 ntBASIC4.27□□□□□ -1.73
CD40P25942 RNU6-14P-201ENST00000384630 106 ntBASIC4.27□□□□□ -1.73
CD40P25942 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CD40P25942 RPS20P15-201ENST00000412792 311 ntBASIC4.27□□□□□ -1.73
CD40P25942 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.27□□□□□ -1.73
CD40P25942 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.27□□□□□ -1.73
CD40P25942 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40P25942 HMGB1P18-201ENST00000438801 619 ntBASIC4.27□□□□□ -1.73
CD40P25942 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.27□□□□□ -1.73
CD40P25942 AL691482.1-201ENST00000453255 87 ntBASIC4.27□□□□□ -1.73
CD40P25942 HSPE1P6-201ENST00000479457 291 ntBASIC4.27□□□□□ -1.73
CD40P25942 COX6B1P2-201ENST00000489624 230 ntBASIC4.27□□□□□ -1.73
CD40P25942 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.27□□□□□ -1.73
CD40P25942 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.27□□□□□ -1.73
CD40P25942 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.27□□□□□ -1.73
CD40P25942 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40P25942 AP000763.2-201ENST00000540641 163 ntBASIC4.27□□□□□ -1.73
CD40P25942 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40P25942 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.27□□□□□ -1.73
CD40P25942 BNIP3P25-201ENST00000596023 559 ntBASIC4.27□□□□□ -1.73
CD40P25942 AC103710.3-201ENST00000608157 948 ntBASIC4.27□□□□□ -1.73
CD40P25942 AC104237.2-201ENST00000612456 443 ntBASIC4.27□□□□□ -1.73
CD40P25942 AL359547.2-201ENST00000615810 418 ntBASIC4.27□□□□□ -1.73
CD40P25942 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.27□□□□□ -1.73
CD40P25942 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CD40P25942 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40P25942 AC010266.2-201ENST00000564741 3255 ntBASIC4.27□□□□□ -1.73
CD40P25942 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD40P25942 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.26□□□□□ -1.73
CD40P25942 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.26□□□□□ -1.73
CD40P25942 Y_RNA.167-201ENST00000363735 109 ntBASIC4.26□□□□□ -1.73
CD40P25942 U3.12-201ENST00000364498 214 ntBASIC4.26□□□□□ -1.73
CD40P25942 RNU6-1127P-201ENST00000384580 107 ntBASIC4.26□□□□□ -1.73
CD40P25942 RPS4XP9-201ENST00000405151 780 ntBASIC4.26□□□□□ -1.73
CD40P25942 RNA5SP113-201ENST00000410486 84 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.26□□□□□ -1.73
CD40P25942 COX5BP7-201ENST00000414780 274 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC016831.2-201ENST00000417179 352 ntBASIC4.26□□□□□ -1.73
CD40P25942 HMGB3P9-201ENST00000441799 583 ntBASIC4.26□□□□□ -1.73
CD40P25942 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.26□□□□□ -1.73
CD40P25942 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 HMGN2P21-201ENST00000447764 270 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC104058.1-201ENST00000448028 297 ntBASIC4.26□□□□□ -1.73
CD40P25942 OR1H1P-201ENST00000448731 937 ntBASIC4.26□□□□□ -1.73
CD40P25942 RPS15AP27-201ENST00000449183 343 ntBASIC4.26□□□□□ -1.73
CD40P25942 RPS29P22-201ENST00000472363 168 ntBASIC4.26□□□□□ -1.73
CD40P25942 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.26□□□□□ -1.73
CD40P25942 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.26□□□□□ -1.73
CD40P25942 HMGB1P22-201ENST00000505315 124 ntBASIC4.26□□□□□ -1.73
CD40P25942 OR7H2P-201ENST00000513483 306 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.26□□□□□ -1.73
CD40P25942 RNU6-277P-201ENST00000516272 106 ntBASIC4.26□□□□□ -1.73
CD40P25942 RNA5SP230-201ENST00000517039 122 ntBASIC4.26□□□□□ -1.73
CD40P25942 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.26□□□□□ -1.73
CD40P25942 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.26□□□□□ -1.73
CD40P25942 AL355836.1-201ENST00000555951 870 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC106782.4-201ENST00000568264 210 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC091042.1-201ENST00000579213 173 ntBASIC4.26□□□□□ -1.73
CD40P25942 MIR4660-201ENST00000583549 74 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC044792.1-201ENST00000593294 196 ntBASIC4.26□□□□□ -1.73
CD40P25942 BDH2P1-201ENST00000602288 736 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC174048.1-201ENST00000603389 144 ntBASIC4.26□□□□□ -1.73
CD40P25942 AC092747.3-201ENST00000603769 301 ntBASIC4.26□□□□□ -1.73
CD40P25942 MIR6820-201ENST00000611508 62 ntBASIC4.26□□□□□ -1.73
CD40P25942 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms