Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XRCC1P18887 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.07□□□□□ -1.92
XRCC1P18887 AADACP1-206ENST00000561502 1193 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.07□□□□□ -1.92
XRCC1P18887 UBL5P2-201ENST00000583788 219 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XRCC1P18887 AC092953.2-201ENST00000608000 699 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AC243773.3-201ENST00000613270 256 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.07□□□□□ -1.92
XRCC1P18887 AC004009.2-201ENST00000623016 728 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AC090772.4-201ENST00000623599 362 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XRCC1P18887 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
XRCC1P18887 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
XRCC1P18887 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.06□□□□□ -1.92
XRCC1P18887 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
XRCC1P18887 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
XRCC1P18887 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 RNU4-68P-201ENST00000364314 141 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
XRCC1P18887 ERHP2-201ENST00000402323 299 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 HMGB1P17-201ENST00000403495 628 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 RNU4-65P-201ENST00000410473 140 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AC092447.6-201ENST00000414578 210 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AL356320.2-201ENST00000417263 507 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AC019178.2-201ENST00000423595 505 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 ZNF833P-201ENST00000424938 1494 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 USP9YP11-201ENST00000427537 717 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 MTND2P5-201ENST00000432656 1006 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 OR2B8P-201ENST00000432841 938 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 USP9YP24-201ENST00000434374 697 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
XRCC1P18887 RPS12P18-201ENST00000442381 270 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 USP9YP17-201ENST00000444617 696 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 MTCO3P11-201ENST00000455103 774 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
XRCC1P18887 AC096751.1-202ENST00000502691 1067 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.06□□□□□ -1.92
XRCC1P18887 UBE2V1P12-201ENST00000503954 474 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.06□□□□□ -1.92
XRCC1P18887 RNU6-583P-201ENST00000516012 92 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.06□□□□□ -1.92
XRCC1P18887 SETP7-201ENST00000552169 453 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.06□□□□□ -1.92
XRCC1P18887 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.06□□□□□ -1.92
XRCC1P18887 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.06□□□□□ -1.92
XRCC1P18887 AC012669.1-201ENST00000603209 283 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AC109809.1-201ENST00000619665 545 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AC099506.2-201ENST00000623074 221 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 AL356585.4-201ENST00000623078 1229 ntBASIC3.06□□□□□ -1.92
XRCC1P18887 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.06□□□□□ -1.92
XRCC1P18887 AC002546.1-201ENST00000588041 2504 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.05□□□□□ -1.92
XRCC1P18887 AL079343.1-201ENST00000572358 1771 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 AL353743.1-202ENST00000431724 1695 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 AC010733.2-201ENST00000589496 5702 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AL356473.1-201ENST00000406203 1408 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.05□□□□□ -1.92
XRCC1P18887 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 RPL23AP57-201ENST00000332361 466 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 DEFB109C-201ENST00000382575 264 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 DEFB109B-201ENST00000382656 264 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 RNU6-1074P-201ENST00000383995 104 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 MIR128-1-201ENST00000384921 82 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
XRCC1P18887 SAR1AP2-201ENST00000392696 594 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 RNA5SP80-201ENST00000410475 111 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 Z92545.1-201ENST00000411782 234 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC068533.2-201ENST00000411872 306 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 TIMM9P2-201ENST00000419324 266 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.05□□□□□ -1.92
XRCC1P18887 AL513175.2-201ENST00000422071 443 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.05□□□□□ -1.92
XRCC1P18887 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
XRCC1P18887 RPL23AP76-201ENST00000441860 458 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.05□□□□□ -1.92
XRCC1P18887 TRGVB-201ENST00000453257 471 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.05□□□□□ -1.92
XRCC1P18887 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 COX7A2P2-201ENST00000505291 250 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 MLLT10P2-201ENST00000506434 249 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 AC008837.2-201ENST00000513076 418 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 RNA5SP385-201ENST00000515947 110 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 RNU1-61P-201ENST00000516107 151 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.05□□□□□ -1.92
XRCC1P18887 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.05□□□□□ -1.92
XRCC1P18887 AP002404.1-201ENST00000532005 451 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.05□□□□□ -1.92
XRCC1P18887 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.05□□□□□ -1.92
XRCC1P18887 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
XRCC1P18887 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms