Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 CYCSP49-201ENST00000420810 319 ntBASIC7.07□□□□□ -1.28
CD44P16070 COL11A2P1-205ENST00000441798 676 ntBASIC7.07□□□□□ -1.28
CD44P16070 AC245047.8-201ENST00000456455 284 ntBASIC7.07□□□□□ -1.28
CD44P16070 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.07□□□□□ -1.28
CD44P16070 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.07□□□□□ -1.28
CD44P16070 AC018645.1-201ENST00000505003 109 ntBASIC7.07□□□□□ -1.28
CD44P16070 RN7SKP122-201ENST00000515923 296 ntBASIC7.07□□□□□ -1.28
CD44P16070 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.07□□□□□ -1.28
CD44P16070 HMGB1P14-201ENST00000557424 591 ntBASIC7.07□□□□□ -1.28
CD44P16070 TPRX1P1-201ENST00000557620 319 ntBASIC7.07□□□□□ -1.28
CD44P16070 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.07□□□□□ -1.28
CD44P16070 AC008121.1-201ENST00000603244 268 ntBASIC7.07□□□□□ -1.28
CD44P16070 AL355816.1-201ENST00000607951 118 ntBASIC7.07□□□□□ -1.28
CD44P16070 AL391261.4-201ENST00000616012 481 ntBASIC7.07□□□□□ -1.28
CD44P16070 LINC02495-203ENST00000636704 242 ntBASIC7.07□□□□□ -1.28
CD44P16070 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 AC009779.8-201ENST00000641684 4384 ntBASIC7.07□□□□□ -1.28
CD44P16070 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.07□□□□□ -1.28
CD44P16070 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.07□□□□□ -1.28
CD44P16070 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CD44P16070 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 Y_RNA.24-201ENST00000362508 103 ntBASIC7.06□□□□□ -1.28
CD44P16070 RNA5SP478-201ENST00000364657 115 ntBASIC7.06□□□□□ -1.28
CD44P16070 LCN1P2-201ENST00000372030 223 ntBASIC7.06□□□□□ -1.28
CD44P16070 SNORA7A-201ENST00000384765 139 ntBASIC7.06□□□□□ -1.28
CD44P16070 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.06□□□□□ -1.28
CD44P16070 MRPS21P2-201ENST00000424704 264 ntBASIC7.06□□□□□ -1.28
CD44P16070 GAS5-208ENST00000425771 242 ntTSL 3 BASIC7.06□□□□□ -1.28
CD44P16070 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.06□□□□□ -1.28
CD44P16070 RPS27P20-201ENST00000492051 246 ntBASIC7.06□□□□□ -1.28
CD44P16070 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC7.06□□□□□ -1.28
CD44P16070 RNU6-1315P-201ENST00000517187 99 ntBASIC7.06□□□□□ -1.28
CD44P16070 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.06□□□□□ -1.28
CD44P16070 AC018630.3-201ENST00000542637 96 ntBASIC7.06□□□□□ -1.28
CD44P16070 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.06□□□□□ -1.28
CD44P16070 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.06□□□□□ -1.28
CD44P16070 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC7.06□□□□□ -1.28
CD44P16070 MIR1273C-201ENST00000578669 77 ntBASIC7.06□□□□□ -1.28
CD44P16070 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
CD44P16070 MIR6085-201ENST00000618314 110 ntBASIC7.06□□□□□ -1.28
CD44P16070 MIR6130-201ENST00000619419 109 ntBASIC7.06□□□□□ -1.28
CD44P16070 AC027506.1-201ENST00000621395 198 ntBASIC7.06□□□□□ -1.28
CD44P16070 MIR3202-2-201ENST00000635980 79 ntBASIC7.06□□□□□ -1.28
CD44P16070 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
CD44P16070 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.06□□□□□ -1.28
CD44P16070 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.06□□□□□ -1.28
CD44P16070 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CD44P16070 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC7.05□□□□□ -1.28
CD44P16070 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
CD44P16070 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.05□□□□□ -1.28
CD44P16070 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 Y_RNA.293-201ENST00000364908 93 ntBASIC7.05□□□□□ -1.28
CD44P16070 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 MIRLET7F2-201ENST00000385277 83 ntBASIC7.05□□□□□ -1.28
CD44P16070 RNU6-1199P-201ENST00000411249 104 ntBASIC7.05□□□□□ -1.28
CD44P16070 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC7.05□□□□□ -1.28
CD44P16070 RPS10P14-201ENST00000440748 502 ntBASIC7.05□□□□□ -1.28
CD44P16070 RPL39P29-201ENST00000447779 157 ntBASIC7.05□□□□□ -1.28
CD44P16070 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC7.05□□□□□ -1.28
CD44P16070 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.05□□□□□ -1.28
CD44P16070 AC084851.1-201ENST00000529105 249 ntBASIC7.05□□□□□ -1.28
CD44P16070 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.05□□□□□ -1.28
CD44P16070 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.05□□□□□ -1.28
CD44P16070 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 AL078624.2-201ENST00000605063 554 ntBASIC7.05□□□□□ -1.28
CD44P16070 AL357075.2-201ENST00000614906 189 ntBASIC7.05□□□□□ -1.28
CD44P16070 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.05□□□□□ -1.28
CD44P16070 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CD44P16070 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
CD44P16070 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CD44P16070 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CD44P16070 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC7.04□□□□□ -1.28
CD44P16070 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC7.04□□□□□ -1.28
CD44P16070 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms