Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CACYBPP1-201ENST00000438592 684 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 MTCO1P14-201ENST00000441695 1559 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 MTND4P19-201ENST00000446659 478 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC021678.1-201ENST00000505195 936 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC008083.2-201ENST00000546707 476 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 MTND6P33-201ENST00000571794 183 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 MIR5680-201ENST00000577577 84 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.4□□□□□ -1.71
COL11A2P13942 MIR4276-201ENST00000584832 70 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 AC009977.1-201ENST00000586015 570 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.4□□□□□ -1.71
COL11A2P13942 AL162413.1-201ENST00000603198 110 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 AP001836.1-201ENST00000604675 523 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 AC002550.2-201ENST00000621246 394 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.4□□□□□ -1.71
COL11A2P13942 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
COL11A2P13942 AC093849.1-201ENST00000563631 2209 ntBASIC4.4□□□□□ -1.71
COL11A2P13942 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL11A2P13942 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A2P13942 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.39□□□□□ -1.71
COL11A2P13942 RNU4-79P-201ENST00000362764 141 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 RNU6-1227P-201ENST00000383981 107 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 NACAP7-201ENST00000407371 609 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.39□□□□□ -1.71
COL11A2P13942 AMD1P2-201ENST00000412936 992 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.39□□□□□ -1.71
COL11A2P13942 BTF3L4P3-201ENST00000418879 476 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AL513185.2-201ENST00000425543 193 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
COL11A2P13942 AC002486.1-201ENST00000435098 391 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 MTCYBP45-201ENST00000435243 565 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.39□□□□□ -1.71
COL11A2P13942 NPM1P39-201ENST00000449818 867 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AL590365.1-201ENST00000450788 243 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AC239798.3-201ENST00000454459 408 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AC010493.1-201ENST00000513479 292 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.39□□□□□ -1.71
COL11A2P13942 RNU6-430P-201ENST00000517078 107 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AL512310.1-201ENST00000548639 172 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 RPL21P5-201ENST00000554662 472 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 AL512360.1-201ENST00000555346 234 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 MIR3671-201ENST00000580455 88 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 PISRT1-201ENST00000626175 531 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.39□□□□□ -1.71
COL11A2P13942 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
COL11A2P13942 AL121839.2-201ENST00000565058 6943 ntBASIC4.39□□□□□ -1.71
COL11A2P13942 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A2P13942 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
COL11A2P13942 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 AC020633.1-201ENST00000468439 2247 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 RNU6-251P-201ENST00000363235 104 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 SNORA63-201ENST00000363450 132 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 Y_RNA.142-201ENST00000363491 102 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 RNU6-1085P-201ENST00000363576 107 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 Y_RNA.160-201ENST00000363677 92 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 Y_RNA.548-201ENST00000384656 105 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 HDGFP1-201ENST00000405943 252 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AL450338.1-201ENST00000407987 512 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 MTND3P17-201ENST00000416968 344 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 AF228730.4-201ENST00000421457 183 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AL953862.1-201ENST00000423016 168 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 HMGB3P12-201ENST00000438745 556 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 FTH1P25-201ENST00000447665 469 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC006480.1-201ENST00000449887 378 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 USP9YP12-201ENST00000450481 570 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 PMCHL2-203ENST00000457791 237 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 RPL32P34-201ENST00000486380 400 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.38□□□□□ -1.71
COL11A2P13942 AC114786.4-201ENST00000508771 728 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.38□□□□□ -1.71
COL11A2P13942 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 AC068587.4-201ENST00000533893 186 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.38□□□□□ -1.71
COL11A2P13942 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 AL359212.1-201ENST00000556608 614 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 MIR3682-201ENST00000581338 84 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms