Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 RNU6-906P-201ENST00000384700 70 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 MIR493-201ENST00000385254 89 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 U3.19-201ENST00000390893 196 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 U3.42-201ENST00000408746 214 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 RN7SKP27-201ENST00000410684 333 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 RNA5SP120-201ENST00000410900 112 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AL592310.1-201ENST00000414330 671 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC024082.2-201ENST00000434771 238 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 BX322784.1-201ENST00000455793 1077 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AL136097.1-201ENST00000456945 913 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 RN7SL601P-201ENST00000471221 293 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC007537.2-201ENST00000472093 511 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC108860.1-201ENST00000484521 383 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 RNU6-150P-201ENST00000516237 95 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 SCARNA1-201ENST00000517138 166 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 ERHP1-201ENST00000523006 310 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 DEFB131D-201ENST00000526803 184 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AL163153.1-201ENST00000554223 283 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 MTCO2P2-201ENST00000591258 225 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC013444.2-201ENST00000603317 787 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC006270.3-201ENST00000605967 1036 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC002076.2-201ENST00000617362 122 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 AC244100.1-202ENST00000621554 382 ntBASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
IGHV3-43DP0DP04 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC093831.2-201ENST00000624393 3427 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL513185.3-201ENST00000433335 1300 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 FRG1BP-201ENST00000278882 761 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RNU4-92P-201ENST00000363783 136 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RNA5SP72-201ENST00000364442 117 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RNU6-1242P-201ENST00000391052 103 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RNU6-952P-201ENST00000391164 108 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RNA5SP274-201ENST00000410484 108 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 ARF4P2-201ENST00000430209 526 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 HIGD1AP11-201ENST00000438361 280 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 MTCYBP31-201ENST00000438855 1122 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 THAP5P1-201ENST00000439089 262 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 OR6K5P-201ENST00000447050 945 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 PTENP1-201ENST00000447117 1215 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 HMGB3P8-201ENST00000449709 577 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 snoU13.8-201ENST00000458890 104 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RNA5SP310-201ENST00000459084 116 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RPL7P49-201ENST00000471402 708 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL049830.2-201ENST00000480072 201 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 VN1R104P-201ENST00000505115 1009 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC017037.2-201ENST00000513850 890 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 RN7SKP272-201ENST00000516988 232 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL132857.1-201ENST00000555180 708 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 CYCSP2-201ENST00000558168 301 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AP005205.1-201ENST00000563503 508 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC009712.1-201ENST00000564938 316 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AP002826.1-201ENST00000608835 315 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC245297.2-201ENST00000610119 565 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL450489.1-201ENST00000612071 468 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL590099.1-201ENST00000615276 138 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AL357080.1-201ENST00000617394 239 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 OR8B1P-202ENST00000641132 1178 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC009812.4-201ENST00000569134 1805 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 AC021755.1-201ENST00000559747 1447 ntBASIC2.51□□□□□ -2.01
IGHV3-43DP0DP04 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
IGHV3-43DP0DP04 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
IGHV3-43DP0DP04 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms