Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-362P-201ENST00000516736 90 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 RN7SKP219-201ENST00000516825 296 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC103833.1-201ENST00000517442 172 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A2P08572 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A2P08572 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.14□□□□□ -2.07
COL4A2P08572 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.14□□□□□ -2.07
COL4A2P08572 MTND5P21-201ENST00000531961 522 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AL356575.1-201ENST00000603008 283 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC016727.1-205ENST00000605437 569 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A2P08572 AC004775.1-201ENST00000607389 753 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AL359198.2-201ENST00000611836 194 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC244517.12-201ENST00000623581 663 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC004943.3-201ENST00000624116 600 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A2P08572 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A2P08572 AC011460.1-201ENST00000636268 1834 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL4A2P08572 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.13□□□□□ -2.07
COL4A2P08572 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.13□□□□□ -2.07
COL4A2P08572 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL4A2P08572 RNU1-17P-201ENST00000363022 152 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 RNU6-650P-201ENST00000365658 111 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 NPM1P10-201ENST00000398310 865 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 MTND4P13-201ENST00000402078 1023 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 HMGB3P31-201ENST00000413333 595 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 AC004022.2-201ENST00000413824 193 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 SETP8-201ENST00000435341 628 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 snoU13.7-201ENST00000459220 104 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.13□□□□□ -2.07
COL4A2P08572 SNX5P1-201ENST00000505757 1041 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A2P08572 AC090071.1-201ENST00000507713 644 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 MTND5P4-201ENST00000514978 288 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.13□□□□□ -2.07
COL4A2P08572 AP001004.1-201ENST00000582468 324 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 LLPHP1-201ENST00000603571 367 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 AL450270.1-201ENST00000606160 391 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 AP001033.2-201ENST00000609701 1003 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
COL4A2P08572 YWHAEP7-203ENST00000622054 312 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A2P08572 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A2P08572 AL590396.2-201ENST00000636511 1041 ntBASIC2.13□□□□□ -2.07
COL4A2P08572 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
COL4A2P08572 Y_RNA.140-201ENST00000363474 103 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 MIR525-201ENST00000384978 85 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 Y_RNA.595-201ENST00000410403 105 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A2P08572 EI24P1-201ENST00000416584 867 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A2P08572 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 AC129850.1-201ENST00000436203 508 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A2P08572 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A2P08572 AC068135.1-201ENST00000446164 246 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 MTND2P6-201ENST00000455337 1030 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 RPL37P6-202ENST00000464216 403 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.12□□□□□ -2.07
COL4A2P08572 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A2P08572 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A2P08572 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A2P08572 AC104108.1-201ENST00000509930 412 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 RN7SKP282-201ENST00000516824 299 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 RN7SKP234-201ENST00000517173 224 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.12□□□□□ -2.07
COL4A2P08572 AC083923.1-201ENST00000523708 376 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A2P08572 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.12□□□□□ -2.07
COL4A2P08572 AC135178.6-201ENST00000605314 398 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 AC113194.1-201ENST00000606037 500 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 STMN1P1-201ENST00000617809 440 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 AC073569.3-201ENST00000619055 682 ntBASIC2.12□□□□□ -2.07
COL4A2P08572 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.12□□□□□ -2.07
COL4A2P08572 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A2P08572 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A2P08572 AC010680.1-201ENST00000590024 3590 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 RNA5SP167-201ENST00000365461 116 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 RNA5SP213-201ENST00000391031 106 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 SPA17P1-201ENST00000416656 452 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.11□□□□□ -2.07
COL4A2P08572 SNORD13-201ENST00000459299 104 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC133963.2-201ENST00000513686 578 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 RN7SKP31-201ENST00000516354 278 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 AL731537.2-201ENST00000561565 951 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.11□□□□□ -2.07
COL4A2P08572 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC040174.2-201ENST00000602701 465 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AC020658.4-201ENST00000613987 684 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms