Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC104027.1-201ENST00000521887 300 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 OR5G4P-201ENST00000525251 760 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHRNA1P02708 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.25□□□□□ -1.89
CHRNA1P02708 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHRNA1P02708 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.25□□□□□ -1.89
CHRNA1P02708 RPL23AP92-201ENST00000603609 255 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 AC010738.1-201ENST00000604970 987 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 AC112220.2-201ENST00000605513 533 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 AL391834.2-201ENST00000609982 546 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 AL445984.1-201ENST00000637834 659 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHRNA1P02708 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHRNA1P02708 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHRNA1P02708 AP002907.1-201ENST00000606361 1430 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 AL049780.3-201ENST00000624612 1583 ntBASIC3.25□□□□□ -1.89
CHRNA1P02708 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
CHRNA1P02708 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHRNA1P02708 RNU6-878P-201ENST00000384578 110 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 RNU6-925P-201ENST00000384629 104 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 SNORD65.1-201ENST00000390889 71 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 RNU2-15P-201ENST00000410692 191 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AL449283.1-202ENST00000418249 604 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA1P02708 AC099677.1-201ENST00000420575 175 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA1P02708 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA1P02708 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHRNA1P02708 FTH1P1-201ENST00000437933 532 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AC079776.3-201ENST00000450665 370 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.24□□□□□ -1.89
CHRNA1P02708 snoU109.4-201ENST00000458953 143 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHRNA1P02708 MLLT10P2-201ENST00000506434 249 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 ARL4AP2-201ENST00000507378 601 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CHRNA1P02708 AC026412.2-201ENST00000512270 1075 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 RNU6-27P-201ENST00000516146 107 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
CHRNA1P02708 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.24□□□□□ -1.89
CHRNA1P02708 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.24□□□□□ -1.89
CHRNA1P02708 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA1P02708 AP005205.1-201ENST00000563503 508 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AC087481.2-201ENST00000565492 330 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.24□□□□□ -1.89
CHRNA1P02708 MIR4319-201ENST00000577285 85 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA1P02708 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA1P02708 VN1R90P-201ENST00000595717 726 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 BDH2P1-201ENST00000602288 736 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 ATP1B3P1-201ENST00000605365 821 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 OR2AS2P-201ENST00000606902 342 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 VIS1.1-201ENST00000610517 203 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AC005332.6-201ENST00000613178 446 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 AP003485.2-201ENST00000623636 610 ntBASIC3.24□□□□□ -1.89
CHRNA1P02708 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.24□□□□□ -1.89
CHRNA1P02708 API5P2-201ENST00000397055 1498 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CHRNA1P02708 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA1P02708 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA1P02708 MIR148B-201ENST00000362252 99 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 RNU6-1074P-201ENST00000383995 104 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 RNU6-851P-201ENST00000384565 107 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 MIR506-201ENST00000384998 124 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 MIR122-201ENST00000385044 85 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 U3.29-201ENST00000391296 212 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 SETP8-201ENST00000435341 628 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 USP9YP22-201ENST00000438971 294 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 RPS24P13-201ENST00000442520 397 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.23□□□□□ -1.89
CHRNA1P02708 RPS23P3-201ENST00000470993 430 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.23□□□□□ -1.89
CHRNA1P02708 RNU6-1261P-201ENST00000517194 104 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 AC091163.3-201ENST00000518269 1144 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA1P02708 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 COX6CP8-201ENST00000522620 226 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.23□□□□□ -1.89
CHRNA1P02708 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA1P02708 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AC138915.2-201ENST00000569776 97 ntBASIC3.23□□□□□ -1.89
CHRNA1P02708 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA1P02708 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms