Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 RPL23AP48-201ENST00000406913 488 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC010385.1-201ENST00000412374 256 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 MTCYBP34-201ENST00000439552 670 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.47□□□□□ -1.85
COL2A1P02458 RNU6-956P-201ENST00000458868 103 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC135999.1-201ENST00000478962 479 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC026414.1-201ENST00000504046 698 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC079140.3-201ENST00000511111 550 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 MTCYBP19-201ENST00000517463 1124 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.47□□□□□ -1.85
COL2A1P02458 DEFB130C-202ENST00000530001 230 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC016957.1-201ENST00000534895 309 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.47□□□□□ -1.85
COL2A1P02458 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.47□□□□□ -1.85
COL2A1P02458 MIR4999-201ENST00000585029 91 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
COL2A1P02458 VN1R90P-201ENST00000595717 726 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 AC010678.1-201ENST00000614118 713 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC013476.2-201ENST00000614456 459 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.47□□□□□ -1.85
COL2A1P02458 SEPT14P19-203ENST00000633205 211 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
COL2A1P02458 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.46□□□□□ -1.85
COL2A1P02458 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
COL2A1P02458 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.85
COL2A1P02458 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
COL2A1P02458 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
COL2A1P02458 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
COL2A1P02458 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
COL2A1P02458 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.46□□□□□ -1.86
COL2A1P02458 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
COL2A1P02458 AL031577.2-201ENST00000404133 280 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 RN7SKP285-201ENST00000410137 318 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 RNU2-22P-201ENST00000411266 212 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 BMS1P22-201ENST00000414726 313 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.46□□□□□ -1.86
COL2A1P02458 GTF2IP23-201ENST00000423746 351 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 RAB9AP5-201ENST00000437794 597 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 MTND3P1-201ENST00000441336 220 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.46□□□□□ -1.86
COL2A1P02458 RAB9AP2-201ENST00000443911 597 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 NIPA2P5-201ENST00000452282 464 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 KATNBL1P6-201ENST00000453433 915 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.46□□□□□ -1.86
COL2A1P02458 TRBV12-1-201ENST00000479785 344 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.46□□□□□ -1.86
COL2A1P02458 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
COL2A1P02458 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.46□□□□□ -1.86
COL2A1P02458 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.46□□□□□ -1.86
COL2A1P02458 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 MTCO3P15-201ENST00000526563 574 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 HIGD1AP10-201ENST00000527837 282 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.46□□□□□ -1.86
COL2A1P02458 AADACP1-206ENST00000561502 1193 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.46□□□□□ -1.86
COL2A1P02458 HMGB1P6-201ENST00000569046 646 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AC079089.3-201ENST00000603094 673 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AC007566.2-201ENST00000603642 413 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AC016727.1-205ENST00000605437 569 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 Z99129.1-201ENST00000612510 255 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 FRG1HP-204ENST00000617940 757 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 RMST_5.1-201ENST00000618704 126 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.46□□□□□ -1.86
COL2A1P02458 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 AC099654.10-201ENST00000640395 161 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COL2A1P02458 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 AP003122.5-201ENST00000527668 3766 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL2A1P02458 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.46□□□□□ -1.86
COL2A1P02458 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 GABRG2-229ENST00000641017 3628 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
COL2A1P02458 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL2A1P02458 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL2A1P02458 MIR142-201ENST00000384835 87 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 SNORA40.2-201ENST00000390847 128 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 RNU6-932P-201ENST00000391108 106 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 MTCO1P56-201ENST00000401674 224 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.45□□□□□ -1.86
COL2A1P02458 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.45□□□□□ -1.86
COL2A1P02458 TOMM20P4-201ENST00000427861 435 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 SRIP2-201ENST00000428470 166 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms