Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC092427.1-201ENST00000439177 601 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 CR769776.1-201ENST00000441254 787 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 RPL39P6-201ENST00000448289 150 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 OFD1P3Y-201ENST00000453312 783 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.35□□□□□ -1.87
PDGFBP01127 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFBP01127 ARPC3P2-201ENST00000457786 533 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AC026410.2-201ENST00000460281 156 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFBP01127 HMGN2P13-201ENST00000476476 274 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFBP01127 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFBP01127 MTCYBP16-201ENST00000509187 1129 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PDGFBP01127 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFBP01127 RNU6-1225P-201ENST00000516336 65 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 PSMA2P1-201ENST00000526365 646 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AC022690.1-201ENST00000526681 550 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFBP01127 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.35□□□□□ -1.87
PDGFBP01127 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.35□□□□□ -1.87
PDGFBP01127 LARP7P2-201ENST00000575306 125 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFBP01127 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFBP01127 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFBP01127 AC006111.3-201ENST00000622137 383 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AC090897.3-201ENST00000636973 1157 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AL732372.2-225ENST00000642124 456 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
PDGFBP01127 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFBP01127 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.35□□□□□ -1.87
PDGFBP01127 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFBP01127 OR4G11P-202ENST00000642116 1414 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFBP01127 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 CUL1P1-201ENST00000509510 2425 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.34□□□□□ -1.87
PDGFBP01127 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.34□□□□□ -1.87
PDGFBP01127 Y_RNA.192-201ENST00000363977 102 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AL136372.1-201ENST00000403060 228 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 RNU6-1077P-201ENST00000410506 102 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.34□□□□□ -1.87
PDGFBP01127 AL049610.1-201ENST00000423374 372 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AL353705.1-201ENST00000433468 480 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFBP01127 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFBP01127 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.34□□□□□ -1.87
PDGFBP01127 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFBP01127 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.34□□□□□ -1.87
PDGFBP01127 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.34□□□□□ -1.87
PDGFBP01127 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PDGFBP01127 RPS15AP17-201ENST00000470598 390 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PDGFBP01127 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
PDGFBP01127 COX7A2P2-201ENST00000505291 250 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC116353.3-201ENST00000511215 249 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PDGFBP01127 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFBP01127 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFBP01127 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.34□□□□□ -1.87
PDGFBP01127 HSPE1P3-201ENST00000559254 309 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 UBL5P2-201ENST00000583788 219 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AL031176.1-201ENST00000604554 466 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC008962.1-201ENST00000605729 304 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC063944.3-201ENST00000609969 533 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC092106.3-201ENST00000611308 722 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC107075.1-201ENST00000613695 314 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.34□□□□□ -1.87
PDGFBP01127 AC073348.1-201ENST00000623002 331 ntBASIC3.34□□□□□ -1.87
PDGFBP01127 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.34□□□□□ -1.87
PDGFBP01127 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.34□□□□□ -1.88
PDGFBP01127 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PDGFBP01127 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFBP01127 AC097714.1-201ENST00000511272 1647 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFBP01127 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.33□□□□□ -1.88
PDGFBP01127 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.33□□□□□ -1.88
PDGFBP01127 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFBP01127 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.33□□□□□ -1.88
PDGFBP01127 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFBP01127 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFBP01127 RPL27AP8-201ENST00000424277 446 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AL035407.1-201ENST00000429211 571 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AL121890.1-201ENST00000435457 205 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFBP01127 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.33□□□□□ -1.88
PDGFBP01127 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.33□□□□□ -1.88
PDGFBP01127 MTCYBP17-201ENST00000503579 789 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFBP01127 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.33□□□□□ -1.88
PDGFBP01127 RNY4P37-201ENST00000516225 96 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 RN7SKP265-201ENST00000516448 223 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 SNORD59.2-201ENST00000516873 68 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 RNU6-711P-201ENST00000517255 106 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms