Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 MIR6817-201ENST00000615588 66 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.22□□□□□ -2.05
CPSF4O95639 AC231759.1-201ENST00000616455 597 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC068722.2-201ENST00000618734 544 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF4O95639 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF4O95639 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CPSF4O95639 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.21□□□□□ -2.05
CPSF4O95639 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
CPSF4O95639 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF4O95639 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CPSF4O95639 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CPSF4O95639 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CPSF4O95639 SNORA63.3-201ENST00000362682 132 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 RNU6-989P-201ENST00000362756 107 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 RNU5B-1-201ENST00000363286 116 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 RNU6-339P-201ENST00000384310 107 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 RNU6-549P-201ENST00000384433 107 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AL121972.1-201ENST00000402023 252 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 MTCO2P31-201ENST00000402702 684 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AC096664.2-201ENST00000411843 406 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF4O95639 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF4O95639 AC091390.3-201ENST00000426478 338 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 UBE2V1P6-201ENST00000430840 422 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF4O95639 RPS15AP28-201ENST00000435088 386 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF4O95639 AL109933.2-201ENST00000452651 260 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF4O95639 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF4O95639 TRBV26-201ENST00000456572 344 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 HMGN2P13-201ENST00000476476 274 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AC091860.1-201ENST00000505723 432 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF4O95639 AC048346.1-201ENST00000510247 144 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.21□□□□□ -2.06
CPSF4O95639 MTCO2P32-201ENST00000514865 403 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF4O95639 RNU5A-7P-201ENST00000515979 116 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 RPL7P20-201ENST00000520308 745 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AP004371.1-201ENST00000525240 214 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.21□□□□□ -2.06
CPSF4O95639 AC078814.3-201ENST00000553036 491 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 ZNF971P-201ENST00000562068 1249 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 MTND4LP25-201ENST00000570218 163 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AL669831.4-202ENST00000590817 238 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.21□□□□□ -2.06
CPSF4O95639 AC073387.2-201ENST00000604797 784 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 AC090116.1-201ENST00000615679 446 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.21□□□□□ -2.06
CPSF4O95639 AC090617.7-201ENST00000623952 126 ntBASIC2.21□□□□□ -2.06
CPSF4O95639 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.21□□□□□ -2.06
CPSF4O95639 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.21□□□□□ -2.06
CPSF4O95639 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.21□□□□□ -2.06
CPSF4O95639 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF4O95639 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CPSF4O95639 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CPSF4O95639 AC004925.1-201ENST00000624256 2706 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.2□□□□□ -2.06
CPSF4O95639 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CPSF4O95639 FTLP6-201ENST00000355274 422 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 DEFB109C-201ENST00000382575 264 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 DEFB109B-201ENST00000382656 264 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 RNU6-761P-201ENST00000384148 107 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 SNORD116-23-201ENST00000384645 92 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 MCTS2P-201ENST00000394552 546 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 AL139095.1-201ENST00000404326 391 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 AL139098.1-201ENST00000407291 389 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 NUP35P1-201ENST00000422734 947 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF4O95639 NANOGP5-201ENST00000424456 877 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 RPL31P54-201ENST00000429803 370 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.2□□□□□ -2.06
CPSF4O95639 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF4O95639 AC109583.1-201ENST00000432156 268 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 AL831737.1-201ENST00000441288 271 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CPSF4O95639 NDUFA5P7-201ENST00000452914 242 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.2□□□□□ -2.06
CPSF4O95639 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.2□□□□□ -2.06
CPSF4O95639 OR5H5P-201ENST00000503164 928 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF4O95639 HMGB1P22-201ENST00000505315 124 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 NAMPTP2-201ENST00000505629 1115 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 MTCYBP37-201ENST00000510642 1133 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
CPSF4O95639 MTCO3P27-201ENST00000514397 196 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 RNU6-885P-201ENST00000516607 104 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 AC025881.1-201ENST00000518851 512 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 AP003355.1-201ENST00000518956 587 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF4O95639 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF4O95639 AP003385.6-201ENST00000531603 374 ntBASIC2.2□□□□□ -2.06
CPSF4O95639 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.2□□□□□ -2.06
CPSF4O95639 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms