Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL163051.2-201ENST00000618976 735 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHOX2O60902 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SHOX2O60902 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SHOX2O60902 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 RNU6-1005P-201ENST00000384519 107 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 RNU6-851P-201ENST00000384565 107 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 GSTA8P-201ENST00000404253 637 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.63□□□□□ -1.99
SHOX2O60902 RNU6-712P-201ENST00000410558 100 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 MTND1P23-201ENST00000416931 372 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.63□□□□□ -1.99
SHOX2O60902 AL009174.1-201ENST00000426577 416 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 RPL23AP58-201ENST00000440453 469 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 RPS26P30-201ENST00000443431 335 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 VPS26AP1-201ENST00000483197 979 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.63□□□□□ -1.99
SHOX2O60902 MLLT10P2-201ENST00000506434 249 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.63□□□□□ -1.99
SHOX2O60902 AC017037.2-201ENST00000513850 890 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 AC113192.3-201ENST00000529152 742 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHOX2O60902 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SHOX2O60902 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.63□□□□□ -1.99
SHOX2O60902 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.63□□□□□ -1.99
SHOX2O60902 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.63□□□□□ -1.99
SHOX2O60902 AC009570.1-201ENST00000609599 745 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 AC006329.2-201ENST00000611491 394 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.63□□□□□ -1.99
SHOX2O60902 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
SHOX2O60902 AC130650.2-201ENST00000618736 2403 ntBASIC2.63□□□□□ -1.99
SHOX2O60902 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHOX2O60902 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
SHOX2O60902 OR5H2-201ENST00000355273 945 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 Y_RNA.40-201ENST00000362645 93 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 RNU6-1027P-201ENST00000383998 107 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 RNU6-796P-201ENST00000391086 107 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AL121978.1-201ENST00000402778 359 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 RNA5SP38-201ENST00000410750 119 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AL158825.1-201ENST00000414735 521 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AL606495.1-201ENST00000422100 813 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC022018.1-201ENST00000430685 241 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 MTND4LP7-201ENST00000431728 294 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC107083.1-201ENST00000439643 279 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AC010095.1-201ENST00000443543 144 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.62□□□□□ -1.99
SHOX2O60902 AL929288.2-201ENST00000446368 407 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AL671855.1-201ENST00000446875 1203 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOX2O60902 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 RNA5SP282-201ENST00000516355 108 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AP003467.2-201ENST00000520175 319 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.62□□□□□ -1.99
SHOX2O60902 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOX2O60902 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOX2O60902 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOX2O60902 ISCA1P3-201ENST00000577104 373 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 MIR5004-201ENST00000579078 107 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 ATP5A1P2-202ENST00000616464 443 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC010149.2-201ENST00000637608 315 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 CRYM-AS1-204ENST00000637983 556 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 ZNF663P-202ENST00000641770 1131 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.62□□□□□ -1.99
SHOX2O60902 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SHOX2O60902 AC005336.3-201ENST00000623833 2679 ntBASIC2.62□□□□□ -1.99
SHOX2O60902 AL049780.3-201ENST00000624612 1583 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AC091564.4-201ENST00000533934 2194 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.61□□□□□ -1.99
SHOX2O60902 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHOX2O60902 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHOX2O60902 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHOX2O60902 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SHOX2O60902 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SHOX2O60902 RNA5SP374-201ENST00000362939 125 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.61□□□□□ -1.99
SHOX2O60902 CYCSP45-201ENST00000402289 315 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 FAT1P1-201ENST00000406588 507 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.61□□□□□ -1.99
SHOX2O60902 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.61□□□□□ -1.99
SHOX2O60902 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHOX2O60902 AL035410.1-201ENST00000427409 427 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AC011816.1-201ENST00000441346 546 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms