Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR621-201ENST00000384919 96 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 DSTNP4-201ENST00000399472 474 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 MIR921-201ENST00000401133 56 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM13O60858 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RPS15AP12-201ENST00000419498 388 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM13O60858 SKA2P1-201ENST00000425592 390 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 BRWD1P3-201ENST00000428816 390 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 YWHAZP8-201ENST00000436935 731 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL163193.1-201ENST00000444895 788 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM13O60858 AC002381.1-201ENST00000447049 280 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AP001025.2-201ENST00000490908 477 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC097473.1-201ENST00000508142 408 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AP000857.1-201ENST00000532151 543 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC107918.3-201ENST00000533272 382 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM13O60858 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM13O60858 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM13O60858 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM13O60858 GSTP1P1-201ENST00000548078 319 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM13O60858 AL137100.2-201ENST00000555786 315 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM13O60858 MIR4424-201ENST00000585257 86 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM13O60858 BNIP3P25-201ENST00000596023 559 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC123786.2-201ENST00000603459 275 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM13O60858 AL670379.11-201ENST00000604059 253 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL670379.10-201ENST00000604330 253 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL670379.12-201ENST00000605291 253 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL670379.9-201ENST00000605428 253 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL512329.2-201ENST00000607350 548 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AL355810.1-201ENST00000614629 552 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 uc_338.18-201ENST00000615451 175 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM13O60858 AC092125.1-201ENST00000562568 1995 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM13O60858 EOGT-210ENST00000615922 1931 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM13O60858 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM13O60858 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM13O60858 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM13O60858 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM13O60858 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 Y_RNA.117-201ENST00000363294 101 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RN7SKP162-201ENST00000363605 345 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 Y_RNA.167-201ENST00000363735 109 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RNU6-343P-201ENST00000364709 104 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 SNORA68.2-201ENST00000391263 128 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 U3.36-201ENST00000408418 213 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RNU4-6P-201ENST00000410804 122 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 Y_RNA.646-201ENST00000410980 101 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AL133384.1-201ENST00000412744 351 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM13O60858 AC009237.10-201ENST00000414112 510 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 ARL5AP1-201ENST00000418991 388 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AL139396.1-201ENST00000421137 167 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 OR2AM1P-201ENST00000422137 422 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AL031736.2-201ENST00000426573 787 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM13O60858 RPS20P5-201ENST00000434808 360 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RHOT1P3-201ENST00000436571 331 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RPS26P56-201ENST00000444468 240 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM13O60858 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM13O60858 PCNPP5-201ENST00000452246 481 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 HMGB1P15-201ENST00000453854 435 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 RPL23AP56-201ENST00000460778 453 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RPS20P21-201ENST00000466859 343 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RPL12P20-201ENST00000475538 479 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RN7SL817P-201ENST00000480777 288 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM13O60858 AC002456.2-201ENST00000509356 380 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AC021146.3-201ENST00000511911 260 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RNY3P15-201ENST00000516297 97 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 RNA5SP454-201ENST00000517231 127 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM13O60858 AP005435.4-201ENST00000529514 284 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AC022882.1-201ENST00000532142 501 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM13O60858 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM13O60858 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM13O60858 MAGOH2P-202ENST00000584384 429 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM13O60858 IMMP1LP3-201ENST00000604197 224 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AL121612.2-201ENST00000612261 482 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms