Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.44□□□□□ -1.86
LMX1BO60663 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.44□□□□□ -1.86
LMX1BO60663 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.44□□□□□ -1.86
LMX1BO60663 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.44□□□□□ -1.86
LMX1BO60663 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.44□□□□□ -1.86
LMX1BO60663 AC120057.2-201ENST00000571520 271 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.44□□□□□ -1.86
LMX1BO60663 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.44□□□□□ -1.86
LMX1BO60663 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.44□□□□□ -1.86
LMX1BO60663 AC123786.2-201ENST00000603459 275 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 HMGB1P50-201ENST00000605814 607 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 MIR486-1-201ENST00000612171 68 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AL592295.2-201ENST00000612578 206 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC092794.2-201ENST00000620933 563 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
LMX1BO60663 AL359880.1-201ENST00000621879 266 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC039056.2-201ENST00000622261 511 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 DUXAP9-208ENST00000622815 614 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC019226.1-201ENST00000625666 515 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 MIR6863-201ENST00000636112 90 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC099654.14-201ENST00000638599 341 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 IPO8P1-201ENST00000455509 3109 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 FAM91A3P-201ENST00000456826 2544 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
LMX1BO60663 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.44□□□□□ -1.86
LMX1BO60663 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 FARSBP1-201ENST00000435808 1778 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 RNA5SP322-201ENST00000363617 119 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 MTCO3P40-201ENST00000392516 676 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 MIR1277-201ENST00000408536 78 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 MIR1251-201ENST00000408552 70 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL109913.1-201ENST00000421173 514 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 AC073464.1-201ENST00000429823 534 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL451074.3-201ENST00000437709 472 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC073614.1-201ENST00000438690 650 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 HMGB1P37-201ENST00000439613 609 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 RABEPKP1-201ENST00000440529 1026 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.43□□□□□ -1.86
LMX1BO60663 RANP8-201ENST00000444720 713 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.43□□□□□ -1.86
LMX1BO60663 AC104073.1-201ENST00000451988 151 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL136126.1-201ENST00000473603 402 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC092989.1-201ENST00000481235 277 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 MTND1P3-201ENST00000484956 952 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC005726.1-201ENST00000494679 427 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC112204.1-201ENST00000502591 103 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 KCTD9P5-201ENST00000504141 1170 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 AC024589.1-201ENST00000512207 263 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 IGKV2-23-201ENST00000518729 323 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 AP003181.2-201ENST00000528941 181 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.43□□□□□ -1.86
LMX1BO60663 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 AC008127.2-201ENST00000549925 1075 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 AL157394.1-201ENST00000562983 1224 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.43□□□□□ -1.86
LMX1BO60663 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.43□□□□□ -1.86
LMX1BO60663 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC069234.5-201ENST00000611056 416 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AL139089.1-201ENST00000620372 975 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AC103858.2-201ENST00000621471 543 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 AP006248.2-201ENST00000623309 592 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 PISRT1-201ENST00000626175 531 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.43□□□□□ -1.86
LMX1BO60663 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.43□□□□□ -1.86
LMX1BO60663 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.43□□□□□ -1.86
LMX1BO60663 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
LMX1BO60663 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.43□□□□□ -1.86
LMX1BO60663 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMX1BO60663 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.42□□□□□ -1.86
LMX1BO60663 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMX1BO60663 AC130650.2-201ENST00000618736 2403 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC114546.3-201ENST00000623582 1734 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms