Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
GFRA3O60609 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.75□□□□□ -1.49
GFRA3O60609 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 RNU6-1284P-201ENST00000363701 100 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 RNU1-24P-201ENST00000364285 165 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 RNU6-926P-201ENST00000384075 107 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 RNU2-21P-201ENST00000410368 188 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.75□□□□□ -1.49
GFRA3O60609 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.75□□□□□ -1.49
GFRA3O60609 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.75□□□□□ -1.49
GFRA3O60609 AC011753.3-201ENST00000443436 406 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AC073901.1-201ENST00000462471 408 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 RPS26P21-201ENST00000475397 348 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 RNU6-1334P-201ENST00000516032 105 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AC090151.1-201ENST00000520784 730 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.75□□□□□ -1.49
GFRA3O60609 AP001328.1-201ENST00000528550 176 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.75□□□□□ -1.49
GFRA3O60609 AC009962.1-201ENST00000567327 3813 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AP005403.1-201ENST00000579720 229 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AC005046.1-201ENST00000608515 625 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AC034229.6-201ENST00000623704 224 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AC132068.1-201ENST00000623805 459 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 AC008758.3-201ENST00000507003 1829 ntBASIC5.75□□□□□ -1.49
GFRA3O60609 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GFRA3O60609 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
GFRA3O60609 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.75□□□□□ -1.49
GFRA3O60609 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.75□□□□□ -1.49
GFRA3O60609 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
GFRA3O60609 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.75□□□□□ -1.49
GFRA3O60609 AC104162.1-201ENST00000430831 2382 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA3O60609 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
GFRA3O60609 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.74□□□□□ -1.49
GFRA3O60609 RPL9P7-201ENST00000330965 580 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 SNORA25.7-201ENST00000364375 127 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 RNU6-317P-201ENST00000384031 107 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 RNU6-76P-201ENST00000384060 104 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 MIR521-1-201ENST00000384902 87 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GFRA3O60609 SNORA40.19-201ENST00000390846 128 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 AL590139.1-201ENST00000416267 400 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA3O60609 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA3O60609 AL513043.1-201ENST00000439124 535 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 RPS15AP7-201ENST00000439294 405 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 AL389915.2-201ENST00000454576 441 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 TRBV26-201ENST00000456572 344 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA3O60609 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA3O60609 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA3O60609 Y_RNA.797-201ENST00000515977 94 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 RNU2-60P-201ENST00000517290 128 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA3O60609 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA3O60609 AC209154.1-201ENST00000582156 337 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.74□□□□□ -1.49
GFRA3O60609 AC024153.1-201ENST00000603103 365 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 AC006329.2-201ENST00000611491 394 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 AC131009.3-201ENST00000621809 287 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 AC127070.3-201ENST00000503695 3263 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
GFRA3O60609 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GFRA3O60609 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.74□□□□□ -1.49
GFRA3O60609 AL513302.2-201ENST00000562313 1842 ntBASIC5.74□□□□□ -1.49
GFRA3O60609 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA3O60609 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
GFRA3O60609 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
GFRA3O60609 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA3O60609 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 CUBNP3-201ENST00000457461 1784 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
GFRA3O60609 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
GFRA3O60609 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 AC126755.2-208ENST00000327792 462 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms