Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX3O60493 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX3O60493 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX3O60493 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX3O60493 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNX3O60493 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.3□□□□□ -1.88
SNX3O60493 RNA5SP119-201ENST00000362715 117 ntBASIC3.3□□□□□ -1.88
SNX3O60493 RNU1-32P-201ENST00000363937 159 ntBASIC3.3□□□□□ -1.88
SNX3O60493 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX3O60493 RNU6-769P-201ENST00000384407 104 ntBASIC3.3□□□□□ -1.88
SNX3O60493 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SNX3O60493 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.3□□□□□ -1.88
SNX3O60493 RNU6-920P-201ENST00000410926 92 ntBASIC3.3□□□□□ -1.88
SNX3O60493 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX3O60493 CRYBB2P1-203ENST00000415709 538 ntBASIC3.3□□□□□ -1.88
SNX3O60493 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX3O60493 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
SNX3O60493 RAC1P7-201ENST00000445367 377 ntBASIC3.3□□□□□ -1.88
SNX3O60493 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 RPL23AP62-201ENST00000463396 453 ntBASIC3.3□□□□□ -1.88
SNX3O60493 RPS3AP43-201ENST00000479743 781 ntBASIC3.3□□□□□ -1.88
SNX3O60493 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX3O60493 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.3□□□□□ -1.88
SNX3O60493 RPF2P2-201ENST00000504693 896 ntBASIC3.3□□□□□ -1.88
SNX3O60493 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX3O60493 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX3O60493 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX3O60493 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX3O60493 GTF2IP22-201ENST00000554443 182 ntBASIC3.3□□□□□ -1.88
SNX3O60493 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX3O60493 MIR4284-201ENST00000578924 81 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX3O60493 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNX3O60493 AP001330.4-201ENST00000604350 154 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AC005344.1-201ENST00000613391 459 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AL355810.1-201ENST00000614629 552 ntBASIC3.3□□□□□ -1.88
SNX3O60493 SNORD39.4-201ENST00000620099 78 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AC112484.5-201ENST00000624189 228 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AC048347.1-201ENST00000624621 427 ntBASIC3.3□□□□□ -1.88
SNX3O60493 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX3O60493 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX3O60493 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SNX3O60493 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
SNX3O60493 AL356274.2-201ENST00000624379 3752 ntBASIC3.3□□□□□ -1.88
SNX3O60493 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX3O60493 CR383658.2-201ENST00000547576 1525 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AP004289.2-201ENST00000444413 1457 ntBASIC3.29□□□□□ -1.88
SNX3O60493 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SNX3O60493 SNORA51.4-201ENST00000364993 124 ntBASIC3.29□□□□□ -1.88
SNX3O60493 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
SNX3O60493 RNU6-114P-201ENST00000384704 105 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX3O60493 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX3O60493 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 RPL18P10-201ENST00000425606 538 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AL512649.1-201ENST00000428997 581 ntBASIC3.29□□□□□ -1.88
SNX3O60493 RPL23AP69-201ENST00000431134 458 ntBASIC3.29□□□□□ -1.88
SNX3O60493 OR4K11P-201ENST00000431829 904 ntBASIC3.29□□□□□ -1.88
SNX3O60493 OR2B8P-201ENST00000432841 938 ntBASIC3.29□□□□□ -1.88
SNX3O60493 THAP5P1-201ENST00000439089 262 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX3O60493 AC112653.1-201ENST00000443851 386 ntBASIC3.29□□□□□ -1.88
SNX3O60493 FAM103A2P-201ENST00000444122 354 ntBASIC3.29□□□□□ -1.88
SNX3O60493 CDC27P1-201ENST00000445384 715 ntBASIC3.29□□□□□ -1.88
SNX3O60493 UQCRHP3-201ENST00000451503 251 ntBASIC3.29□□□□□ -1.88
SNX3O60493 ZNF114P1-201ENST00000453500 292 ntBASIC3.29□□□□□ -1.88
SNX3O60493 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 RPL7P23-201ENST00000493874 747 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AC034222.1-201ENST00000494052 532 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AP001086.1-201ENST00000494882 321 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 SNORA70.18-201ENST00000516696 98 ntBASIC3.29□□□□□ -1.88
SNX3O60493 MRPL49P2-201ENST00000521066 465 ntBASIC3.29□□□□□ -1.88
SNX3O60493 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.29□□□□□ -1.88
SNX3O60493 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 AC109446.2-201ENST00000567872 497 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX3O60493 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX3O60493 WISP1-OT1-201ENST00000602893 642 ntBASIC3.29□□□□□ -1.88
SNX3O60493 AL109653.1-201ENST00000603091 248 ntBASIC3.29□□□□□ -1.88
SNX3O60493 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms