Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
GRIN3BO60391 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.46□□□□□ -1.54
GRIN3BO60391 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.46□□□□□ -1.54
GRIN3BO60391 RNA5SP124-201ENST00000362739 110 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 SNORD82-201ENST00000365530 70 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 MIR3065-201ENST00000390137 79 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 RPL35AP12-201ENST00000425362 338 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 HMGN2P27-201ENST00000427352 270 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.46□□□□□ -1.54
GRIN3BO60391 MTND6P18-201ENST00000439477 513 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.46□□□□□ -1.54
GRIN3BO60391 ISCUP1-201ENST00000454451 448 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AL163973.1-201ENST00000484753 577 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 HSPD1P15-201ENST00000505573 1122 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 SNORA19.2-201ENST00000516013 114 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 RNA5SP49-201ENST00000516450 115 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.46□□□□□ -1.54
GRIN3BO60391 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.46□□□□□ -1.54
GRIN3BO60391 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.46□□□□□ -1.54
GRIN3BO60391 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.46□□□□□ -1.54
GRIN3BO60391 AC012182.1-201ENST00000570133 895 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.46□□□□□ -1.54
GRIN3BO60391 uc_338.5-201ENST00000611839 155 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AL160413.1-201ENST00000622780 310 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AL159972.1-201ENST00000625150 448 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.46□□□□□ -1.54
GRIN3BO60391 AC100810.6-201ENST00000638068 285 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 AC009093.8-201ENST00000641769 292 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GRIN3BO60391 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
GRIN3BO60391 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GRIN3BO60391 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
GRIN3BO60391 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.46□□□□□ -1.54
GRIN3BO60391 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GRIN3BO60391 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GRIN3BO60391 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.46□□□□□ -1.54
GRIN3BO60391 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GRIN3BO60391 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 Z95327.2-201ENST00000414579 1873 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 AC005332.5-201ENST00000591222 2919 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AL450345.1-202ENST00000605741 3881 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GRIN3BO60391 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GRIN3BO60391 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GRIN3BO60391 RNU5A-8P-201ENST00000364102 114 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
GRIN3BO60391 RNU6-510P-201ENST00000391239 108 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 MTCO3P12-201ENST00000416718 547 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AC009161.1-201ENST00000417306 376 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 NCOR1P3-201ENST00000420479 303 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 SAR1AP4-201ENST00000429225 591 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 NDUFA5P4-201ENST00000436704 385 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 RPL23AP52-201ENST00000439311 478 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GRIN3BO60391 NANOGP10-201ENST00000453325 895 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.45□□□□□ -1.54
GRIN3BO60391 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.45□□□□□ -1.54
GRIN3BO60391 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.45□□□□□ -1.54
GRIN3BO60391 AC023050.3-201ENST00000541142 333 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AC093027.1-201ENST00000546698 429 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.45□□□□□ -1.54
GRIN3BO60391 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.45□□□□□ -1.54
GRIN3BO60391 AC018552.3-201ENST00000567416 561 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 AC010591.1-201ENST00000603941 649 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 SCARNA15.3-201ENST00000626315 122 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 SCARNA4.1-201ENST00000628597 123 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.45□□□□□ -1.54
GRIN3BO60391 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
GRIN3BO60391 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
GRIN3BO60391 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
GRIN3BO60391 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
GRIN3BO60391 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.44□□□□□ -1.54
GRIN3BO60391 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
GRIN3BO60391 NACAP2-201ENST00000318548 624 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 RNA5SP72-201ENST00000364442 117 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 Y_RNA.326-201ENST00000365176 113 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 RNU6-996P-201ENST00000365438 107 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.44□□□□□ -1.54
GRIN3BO60391 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GRIN3BO60391 RNU6-332P-201ENST00000391193 108 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 RNU2-62P-201ENST00000410868 191 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 AL354751.2-201ENST00000415471 210 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 AC127526.1-201ENST00000417526 366 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.44□□□□□ -1.54
GRIN3BO60391 COX6B1P7-201ENST00000430845 235 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.44□□□□□ -1.54
GRIN3BO60391 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.44□□□□□ -1.54
GRIN3BO60391 RPS20P5-201ENST00000434808 360 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.44□□□□□ -1.54
GRIN3BO60391 NOTCH2P1-201ENST00000443481 624 ntBASIC5.44□□□□□ -1.54
GRIN3BO60391 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.44□□□□□ -1.54
GRIN3BO60391 GMFBP1-201ENST00000467831 427 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms