Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC092754.2-201ENST00000463506 460 ntBASIC3.45□□□□□ -1.86
SSX4O60224 RPL7P23-201ENST00000493874 747 ntBASIC3.45□□□□□ -1.86
SSX4O60224 RPL29P14-201ENST00000495837 428 ntBASIC3.45□□□□□ -1.86
SSX4O60224 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 OR5BM1P-201ENST00000512021 366 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AF131216.2-201ENST00000512316 564 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.45□□□□□ -1.86
SSX4O60224 AC025881.1-201ENST00000518851 512 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC103783.1-201ENST00000520506 373 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.45□□□□□ -1.86
SSX4O60224 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 AC025627.2-201ENST00000576220 160 ntBASIC3.45□□□□□ -1.86
SSX4O60224 FAM60BP-201ENST00000578364 658 ntBASIC3.45□□□□□ -1.86
SSX4O60224 MIR4444-1-201ENST00000581696 74 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC060771.1-201ENST00000582031 164 ntBASIC3.45□□□□□ -1.86
SSX4O60224 MIR4444-2-201ENST00000584390 74 ntBASIC3.45□□□□□ -1.86
SSX4O60224 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.45□□□□□ -1.86
SSX4O60224 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.45□□□□□ -1.86
SSX4O60224 AL158211.4-201ENST00000606988 584 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AL391497.1-201ENST00000608671 547 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC012360.2-201ENST00000609349 391 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 AL591424.2-201ENST00000617023 128 ntBASIC3.45□□□□□ -1.86
SSX4O60224 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.45□□□□□ -1.86
SSX4O60224 MIR6075-201ENST00000620782 95 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AL360181.4-201ENST00000621752 134 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC073530.2-201ENST00000623987 261 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AP002001.2-201ENST00000529025 1469 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC092125.1-201ENST00000562568 1995 ntBASIC3.45□□□□□ -1.86
SSX4O60224 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SSX4O60224 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 AC009902.3-201ENST00000606235 2172 ntBASIC3.44□□□□□ -1.86
SSX4O60224 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
SSX4O60224 MTND5P33-201ENST00000571250 1450 ntBASIC3.44□□□□□ -1.86
SSX4O60224 RNU4-21P-201ENST00000362802 126 ntBASIC3.44□□□□□ -1.86
SSX4O60224 SNORD35B-201ENST00000363660 87 ntBASIC3.44□□□□□ -1.86
SSX4O60224 RNU6-1078P-201ENST00000364522 103 ntBASIC3.44□□□□□ -1.86
SSX4O60224 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 RNU6-809P-201ENST00000384461 107 ntBASIC3.44□□□□□ -1.86
SSX4O60224 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SSX4O60224 RNU6-882P-201ENST00000391025 103 ntBASIC3.44□□□□□ -1.86
SSX4O60224 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SSX4O60224 RNU2-43P-201ENST00000410306 190 ntBASIC3.44□□□□□ -1.86
SSX4O60224 CCDC58P2-201ENST00000417131 366 ntBASIC3.44□□□□□ -1.86
SSX4O60224 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX4O60224 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.44□□□□□ -1.86
SSX4O60224 MTCO1P39-201ENST00000426148 480 ntBASIC3.44□□□□□ -1.86
SSX4O60224 SETP8-201ENST00000435341 628 ntBASIC3.44□□□□□ -1.86
SSX4O60224 TXNP1-201ENST00000441872 371 ntBASIC3.44□□□□□ -1.86
SSX4O60224 RAC1P7-201ENST00000445367 377 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 RPS17P13-201ENST00000448974 407 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AP000797.1-201ENST00000478870 387 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.44□□□□□ -1.86
SSX4O60224 AC060788.1-201ENST00000521318 469 ntBASIC3.44□□□□□ -1.86
SSX4O60224 MTND4LP18-201ENST00000526864 291 ntBASIC3.44□□□□□ -1.86
SSX4O60224 HIGD1AP10-201ENST00000527837 282 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX4O60224 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX4O60224 SETP2-201ENST00000553886 926 ntBASIC3.44□□□□□ -1.86
SSX4O60224 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX4O60224 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
SSX4O60224 MIR3690-201ENST00000580266 75 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.44□□□□□ -1.86
SSX4O60224 TPMTP1-201ENST00000592307 737 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX4O60224 AP001429.1-201ENST00000602568 530 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC008739.3-201ENST00000603262 127 ntBASIC3.44□□□□□ -1.86
SSX4O60224 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 AC073114.1-201ENST00000612027 490 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC027807.2-201ENST00000616099 408 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AL590240.3-201ENST00000621416 943 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AL354798.1-201ENST00000622505 329 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC026422.1-201ENST00000623961 452 ntBASIC3.44□□□□□ -1.86
SSX4O60224 AC079597.1-201ENST00000624306 508 ntBASIC3.44□□□□□ -1.86
SSX4O60224 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.44□□□□□ -1.86
SSX4O60224 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 AP001148.1-201ENST00000624124 2359 ntBASIC3.44□□□□□ -1.86
SSX4O60224 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX4O60224 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX4O60224 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSX4O60224 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX4O60224 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX4O60224 AC011460.1-201ENST00000636268 1834 ntBASIC3.43□□□□□ -1.86
SSX4O60224 SNORD116-1-201ENST00000384335 95 ntBASIC3.43□□□□□ -1.86
SSX4O60224 AC007390.1-201ENST00000415722 356 ntBASIC3.43□□□□□ -1.86
SSX4O60224 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX4O60224 AC069157.1-201ENST00000421749 137 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms