Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
MSH5O43196 RNA5SP53-201ENST00000391299 120 ntBASIC9.37□□□□□ -0.91
MSH5O43196 SNORA11B-201ENST00000408175 129 ntBASIC9.37□□□□□ -0.91
MSH5O43196 RPL18AP14-201ENST00000417685 526 ntBASIC9.37□□□□□ -0.91
MSH5O43196 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC9.37□□□□□ -0.91
MSH5O43196 AC090804.1-201ENST00000448870 490 ntBASIC9.37□□□□□ -0.91
MSH5O43196 RN7SL325P-201ENST00000460434 283 ntBASIC9.37□□□□□ -0.91
MSH5O43196 AL049873.1-201ENST00000480540 376 ntBASIC9.37□□□□□ -0.91
MSH5O43196 AC068768.2-201ENST00000602352 343 ntBASIC9.37□□□□□ -0.91
MSH5O43196 LRRC37A12P-201ENST00000454917 1801 ntBASIC9.37□□□□□ -0.91
MSH5O43196 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
MSH5O43196 SMG1P6-201ENST00000532337 2930 ntBASIC9.37□□□□□ -0.91
MSH5O43196 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
MSH5O43196 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
MSH5O43196 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
MSH5O43196 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
MSH5O43196 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC9.36□□□□□ -0.91
MSH5O43196 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 AC103988.1-201ENST00000566382 2177 ntBASIC9.36□□□□□ -0.91
MSH5O43196 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
MSH5O43196 RNU6-105P-201ENST00000363909 104 ntBASIC9.36□□□□□ -0.91
MSH5O43196 Y_RNA.366-201ENST00000365540 102 ntBASIC9.36□□□□□ -0.91
MSH5O43196 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 SNORA70.8-201ENST00000384231 136 ntBASIC9.36□□□□□ -0.91
MSH5O43196 SNORD94-201ENST00000386037 137 ntBASIC9.36□□□□□ -0.91
MSH5O43196 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
MSH5O43196 RPL32P35-201ENST00000415214 394 ntBASIC9.36□□□□□ -0.91
MSH5O43196 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC9.36□□□□□ -0.91
MSH5O43196 EIF4EP4-201ENST00000424916 578 ntBASIC9.36□□□□□ -0.91
MSH5O43196 FTLP17-201ENST00000432567 525 ntBASIC9.36□□□□□ -0.91
MSH5O43196 FTH1P24-201ENST00000503502 462 ntBASIC9.36□□□□□ -0.91
MSH5O43196 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
MSH5O43196 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC9.36□□□□□ -0.91
MSH5O43196 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC9.36□□□□□ -0.91
MSH5O43196 MIR212-201ENST00000586026 110 ntBASIC9.36□□□□□ -0.91
MSH5O43196 RPS11-205ENST00000599561 430 ntTSL 5 BASIC9.36□□□□□ -0.91
MSH5O43196 U1.31-201ENST00000620022 160 ntBASIC9.36□□□□□ -0.91
MSH5O43196 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC9.36□□□□□ -0.91
MSH5O43196 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9.36□□□□□ -0.91
MSH5O43196 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MSH5O43196 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 AC068769.1-201ENST00000474767 2426 ntBASIC9.35□□□□□ -0.91
MSH5O43196 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 AC090132.1-201ENST00000524071 1480 ntBASIC9.35□□□□□ -0.91
MSH5O43196 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC9.35□□□□□ -0.91
MSH5O43196 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.35□□□□□ -0.91
MSH5O43196 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC9.35□□□□□ -0.91
MSH5O43196 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 AC090643.1-201ENST00000623600 3100 ntBASIC9.35□□□□□ -0.91
MSH5O43196 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 RNA5SP52-201ENST00000362448 134 ntBASIC9.35□□□□□ -0.91
MSH5O43196 Y_RNA.190-201ENST00000363964 101 ntBASIC9.35□□□□□ -0.91
MSH5O43196 SNORD115-30-201ENST00000364117 82 ntBASIC9.35□□□□□ -0.91
MSH5O43196 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 AL133388.1-201ENST00000404509 287 ntBASIC9.35□□□□□ -0.91
MSH5O43196 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC9.35□□□□□ -0.91
MSH5O43196 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 FTH1P6-201ENST00000430768 320 ntBASIC9.35□□□□□ -0.91
MSH5O43196 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 RNA5SP471-201ENST00000516971 106 ntBASIC9.35□□□□□ -0.91
MSH5O43196 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC9.35□□□□□ -0.91
MSH5O43196 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC9.35□□□□□ -0.91
MSH5O43196 AL160236.1-201ENST00000556317 195 ntBASIC9.35□□□□□ -0.91
MSH5O43196 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC9.35□□□□□ -0.91
MSH5O43196 PFKM-232ENST00000629846 381 ntTSL 4 BASIC9.35□□□□□ -0.91
MSH5O43196 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.35□□□□□ -0.91
MSH5O43196 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.35□□□□□ -0.91
MSH5O43196 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MSH5O43196 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC9.35□□□□□ -0.91
MSH5O43196 DDX10P2-201ENST00000417796 2614 ntBASIC9.35□□□□□ -0.91
MSH5O43196 MAPK10-270ENST00000641102 3538 ntBASIC9.34□□□□□ -0.91
MSH5O43196 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
MSH5O43196 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
MSH5O43196 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
MSH5O43196 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
MSH5O43196 RNU6-78P-201ENST00000362897 107 ntBASIC9.34□□□□□ -0.91
MSH5O43196 SNORD115-35-201ENST00000365122 82 ntBASIC9.34□□□□□ -0.91
MSH5O43196 RNU6-793P-201ENST00000384233 104 ntBASIC9.34□□□□□ -0.91
MSH5O43196 RPL21P67-201ENST00000402896 478 ntBASIC9.34□□□□□ -0.91
MSH5O43196 AC007064.1-201ENST00000412238 351 ntBASIC9.34□□□□□ -0.91
MSH5O43196 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC9.34□□□□□ -0.91
MSH5O43196 EIF5AP4-201ENST00000441206 465 ntBASIC9.34□□□□□ -0.91
MSH5O43196 RPL23AP24-201ENST00000458203 385 ntBASIC9.34□□□□□ -0.91
MSH5O43196 AC091179.3-201ENST00000474761 144 ntBASIC9.34□□□□□ -0.91
MSH5O43196 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC9.34□□□□□ -0.91
MSH5O43196 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms