Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GPR143P-201ENST00000434155 205 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AL132765.1-201ENST00000434165 553 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC090774.1-201ENST00000435925 246 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 UBE2V1P8-201ENST00000437166 265 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AL662791.1-201ENST00000441992 928 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.19□□□□□ -1.74
PHGDHO43175 snoU13.24-201ENST00000458998 104 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC008481.1-201ENST00000463278 396 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 RPS29P19-201ENST00000479709 171 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC078817.1-201ENST00000492623 435 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC079382.1-201ENST00000493346 557 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 HMGB1P22-201ENST00000505315 124 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.19□□□□□ -1.74
PHGDHO43175 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.19□□□□□ -1.74
PHGDHO43175 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.19□□□□□ -1.74
PHGDHO43175 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.19□□□□□ -1.74
PHGDHO43175 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC123904.3-201ENST00000547218 814 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.19□□□□□ -1.74
PHGDHO43175 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PHGDHO43175 AC004067.1-201ENST00000608733 700 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC103710.2-201ENST00000609912 942 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC068944.2-201ENST00000610373 403 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC024941.1-201ENST00000612250 334 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AC233309.1-201ENST00000619522 751 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 ELF2P3-201ENST00000445099 1506 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHGDHO43175 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PHGDHO43175 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PHGDHO43175 RNU4-12P-201ENST00000365233 139 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PHGDHO43175 CALM2P3-201ENST00000400429 449 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AL590002.1-201ENST00000406554 418 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 MIR1179-201ENST00000408703 91 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 RNA5SP36-201ENST00000410197 133 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AL590139.1-201ENST00000416267 400 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.18□□□□□ -1.74
PHGDHO43175 MTCO2P19-201ENST00000427513 598 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.18□□□□□ -1.74
PHGDHO43175 Z99127.3-201ENST00000448158 395 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC140076.1-201ENST00000449897 361 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.18□□□□□ -1.74
PHGDHO43175 RPL23AP81-201ENST00000455252 467 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.18□□□□□ -1.74
PHGDHO43175 RN7SL98P-201ENST00000462271 300 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC007537.2-201ENST00000472093 511 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC023598.1-201ENST00000472521 361 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 RPL35P6-201ENST00000490024 372 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.18□□□□□ -1.74
PHGDHO43175 AC004062.1-201ENST00000509926 645 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.18□□□□□ -1.74
PHGDHO43175 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.18□□□□□ -1.74
PHGDHO43175 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.18□□□□□ -1.74
PHGDHO43175 AC090281.1-201ENST00000523019 276 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 FAM60DP-201ENST00000524174 632 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC008489.1-201ENST00000524271 483 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 AC109635.4-202ENST00000531666 412 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 TRAV8-5-201ENST00000537369 341 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.18□□□□□ -1.74
PHGDHO43175 AC128657.1-201ENST00000549459 145 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 RPL21P12-201ENST00000559810 515 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.18□□□□□ -1.74
PHGDHO43175 FAM60BP-201ENST00000578364 658 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.18□□□□□ -1.74
PHGDHO43175 MIR4293-201ENST00000584305 78 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AF038458.1-201ENST00000588406 262 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AL391646.1-201ENST00000603860 190 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.18□□□□□ -1.74
PHGDHO43175 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PHGDHO43175 AC090517.2-201ENST00000614966 680 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC103858.2-201ENST00000621471 543 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 AC138649.5-201ENST00000637456 137 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PHGDHO43175 AC139713.2-214ENST00000642059 1811 ntBASIC4.18□□□□□ -1.74
PHGDHO43175 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHGDHO43175 TAB3P1-202ENST00000452645 1634 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.17□□□□□ -1.74
PHGDHO43175 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.17□□□□□ -1.74
PHGDHO43175 AP001350.1-201ENST00000601906 1524 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 RNU6-173P-201ENST00000364215 104 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 SNORA7.2-201ENST00000364446 145 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 Y_RNA.372-201ENST00000365599 102 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 JKAMPP1-201ENST00000413804 919 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.17□□□□□ -1.74
PHGDHO43175 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms