Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PPP1R2P5-201ENST00000457256 603 ntBASIC2.96□□□□□ -1.94
CHD1O14646 MTCYBP17-201ENST00000503579 789 ntBASIC2.96□□□□□ -1.94
CHD1O14646 AL627309.6-201ENST00000606857 840 ntBASIC2.96□□□□□ -1.94
CHD1O14646 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.96□□□□□ -1.94
CHD1O14646 SET-203ENST00000372688 801 ntTSL 2 BASIC2.95□□□□□ -1.94
CHD1O14646 AL035405.1-201ENST00000400795 710 ntBASIC2.95□□□□□ -1.94
CHD1O14646 EIF1AXP1-201ENST00000419267 435 ntBASIC2.95□□□□□ -1.94
CHD1O14646 HSPE1P28-201ENST00000443139 211 ntBASIC2.95□□□□□ -1.94
CHD1O14646 ATP5J2P3-201ENST00000451550 258 ntBASIC2.95□□□□□ -1.94
CHD1O14646 AC108734.3-201ENST00000481241 1165 ntBASIC2.95□□□□□ -1.94
CHD1O14646 MIR449C-201ENST00000516047 92 ntBASIC2.95□□□□□ -1.94
CHD1O14646 AC087441.2-201ENST00000529141 262 ntBASIC2.95□□□□□ -1.94
CHD1O14646 CBX3P4-201ENST00000538909 354 ntBASIC2.95□□□□□ -1.94
CHD1O14646 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.95□□□□□ -1.94
CHD1O14646 AC002984.1-201ENST00000591692 448 ntBASIC2.95□□□□□ -1.94
CHD1O14646 AL645939.4-201ENST00000604495 135 ntBASIC2.95□□□□□ -1.94
CHD1O14646 AL137847.3-201ENST00000611521 109 ntBASIC2.95□□□□□ -1.94
CHD1O14646 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CHD1O14646 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
CHD1O14646 RPS3AP9-201ENST00000417027 792 ntBASIC2.94□□□□□ -1.94
CHD1O14646 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.94□□□□□ -1.94
CHD1O14646 AC017099.1-201ENST00000448261 1028 ntBASIC2.94□□□□□ -1.94
CHD1O14646 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.94□□□□□ -1.94
CHD1O14646 HMGB3P15-201ENST00000507326 574 ntBASIC2.94□□□□□ -1.94
CHD1O14646 MTND4LP22-201ENST00000508209 276 ntBASIC2.94□□□□□ -1.94
CHD1O14646 AC023043.3-201ENST00000593113 385 ntBASIC2.94□□□□□ -1.94
CHD1O14646 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.94□□□□□ -1.94
CHD1O14646 AC073387.2-201ENST00000604797 784 ntBASIC2.94□□□□□ -1.94
CHD1O14646 MIR6895-201ENST00000613497 78 ntBASIC2.94□□□□□ -1.94
CHD1O14646 AL359740.1-201ENST00000624340 592 ntBASIC2.94□□□□□ -1.94
CHD1O14646 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHD1O14646 XKRY2-202ENST00000623874 1581 ntBASIC2.94□□□□□ -1.94
CHD1O14646 XKRY-202ENST00000624960 1581 ntBASIC2.94□□□□□ -1.94
CHD1O14646 AP001486.2-201ENST00000561652 5113 ntBASIC2.94□□□□□ -1.94
CHD1O14646 RNU2-37P-201ENST00000410695 177 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD1O14646 SAR1AP4-201ENST00000429225 591 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AC129850.1-201ENST00000436203 508 ntBASIC2.93□□□□□ -1.94
CHD1O14646 UBE2V1P5-201ENST00000440070 405 ntBASIC2.93□□□□□ -1.94
CHD1O14646 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.93□□□□□ -1.94
CHD1O14646 HMGB3P30-201ENST00000457863 606 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AP000873.1-201ENST00000463987 400 ntBASIC2.93□□□□□ -1.94
CHD1O14646 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD1O14646 COX6CP5-201ENST00000527162 228 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHD1O14646 AC090751.1-201ENST00000566966 267 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AL512598.1-201ENST00000610158 273 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AC005156.1-201ENST00000613371 573 ntBASIC2.93□□□□□ -1.94
CHD1O14646 CFTRP2-201ENST00000634304 199 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AC084035.1-201ENST00000634543 607 ntBASIC2.93□□□□□ -1.94
CHD1O14646 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CHD1O14646 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD1O14646 DPPA2P1-201ENST00000428060 556 ntBASIC2.93□□□□□ -1.94
CHD1O14646 RPL21P2-201ENST00000440049 481 ntBASIC2.93□□□□□ -1.94
CHD1O14646 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.93□□□□□ -1.94
CHD1O14646 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHD1O14646 PTP4A1P6-201ENST00000531034 478 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD1O14646 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHD1O14646 PSMA3P-201ENST00000555485 635 ntBASIC2.93□□□□□ -1.94
CHD1O14646 ZNF192P1-203ENST00000565888 810 ntBASIC2.93□□□□□ -1.94
CHD1O14646 PVT1_3.1-201ENST00000620853 95 ntBASIC2.93□□□□□ -1.94
CHD1O14646 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.93□□□□□ -1.94
CHD1O14646 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
CHD1O14646 AC008568.2-201ENST00000623862 2313 ntBASIC2.92□□□□□ -1.94
CHD1O14646 Y_RNA.327-201ENST00000365201 102 ntBASIC2.92□□□□□ -1.94
CHD1O14646 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.92□□□□□ -1.94
CHD1O14646 SNORD116-26-201ENST00000516006 96 ntBASIC2.92□□□□□ -1.94
CHD1O14646 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.92□□□□□ -1.94
CHD1O14646 MAGOH2P-202ENST00000584384 429 ntBASIC2.92□□□□□ -1.94
CHD1O14646 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHD1O14646 MTND5P3-201ENST00000438536 1800 ntBASIC2.92□□□□□ -1.94
CHD1O14646 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHD1O14646 NR1H5P-201ENST00000452683 1377 ntBASIC2.91□□□□□ -1.94
CHD1O14646 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
CHD1O14646 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.91□□□□□ -1.94
CHD1O14646 AC027124.2-201ENST00000428249 105 ntBASIC2.91□□□□□ -1.94
CHD1O14646 AC022431.1-201ENST00000450941 438 ntBASIC2.91□□□□□ -1.94
CHD1O14646 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CHD1O14646 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.91□□□□□ -1.94
CHD1O14646 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.91□□□□□ -1.94
CHD1O14646 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHD1O14646 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHD1O14646 AL118496.1-201ENST00000440201 1812 ntBASIC2.91□□□□□ -1.94
CHD1O14646 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHD1O14646 U3.15-201ENST00000365398 212 ntBASIC2.9□□□□□ -1.94
CHD1O14646 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.9□□□□□ -1.94
CHD1O14646 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.9□□□□□ -1.94
CHD1O14646 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.9□□□□□ -1.94
CHD1O14646 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CHD1O14646 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.9□□□□□ -1.95
CHD1O14646 POLHP1-201ENST00000411806 470 ntBASIC2.9□□□□□ -1.95
CHD1O14646 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.9□□□□□ -1.95
CHD1O14646 SSXP1-201ENST00000453640 473 ntBASIC2.9□□□□□ -1.95
CHD1O14646 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.9□□□□□ -1.95
CHD1O14646 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.9□□□□□ -1.95
CHD1O14646 RMST_6.1-201ENST00000611980 203 ntBASIC2.9□□□□□ -1.95
CHD1O14646 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.9□□□□□ -1.95
CHD1O14646 Y_RNA.354-201ENST00000365448 111 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms