Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 OR1AA1P-201ENST00000419597 916 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM38O00635 AC114495.1-201ENST00000441274 436 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 USP9YP8-201ENST00000441913 500 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 NFU1P2-201ENST00000448700 469 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 ABCF2P2-201ENST00000450549 296 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AP000797.1-201ENST00000478870 387 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 RPS27AP13-201ENST00000498403 237 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AC008628.2-201ENST00000502605 298 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM38O00635 AC046134.1-201ENST00000514454 666 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 RNU6-1095P-201ENST00000516148 108 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 RNU6-1153P-201ENST00000516760 105 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM38O00635 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM38O00635 CR383656.7-201ENST00000548164 174 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AL121603.1-201ENST00000553815 142 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 SETP2-201ENST00000553886 926 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM38O00635 AL138976.2-201ENST00000563989 694 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM38O00635 AC006254.3-201ENST00000603353 884 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AL161729.3-201ENST00000603533 673 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM38O00635 MIR92B-201ENST00000607575 96 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TRIM38O00635 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM38O00635 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM38O00635 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 AC002550.2-201ENST00000621246 394 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 MIR4727-201ENST00000622232 55 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 AC112484.5-201ENST00000624189 228 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 FER-210ENST00000628534 558 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM38O00635 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM38O00635 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TRIM38O00635 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM38O00635 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM38O00635 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 SNORA7.2-201ENST00000364446 145 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AL590002.1-201ENST00000406554 418 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 RPS20P14-201ENST00000412545 360 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AL356095.1-201ENST00000417217 199 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AL117339.2-201ENST00000430475 180 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 BTF3P10-201ENST00000433415 495 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM38O00635 MTCO3P18-201ENST00000440206 761 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.24□□□□□ -1.73
TRIM38O00635 RPL7P36-201ENST00000444633 681 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC104308.1-201ENST00000454621 333 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AP1S2P1-201ENST00000457344 379 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 TMED11P-201ENST00000479478 690 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC092989.1-201ENST00000481235 277 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 RPS26P15-201ENST00000488067 348 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AL132838.2-201ENST00000492041 314 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC093278.1-201ENST00000494700 600 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC069439.1-201ENST00000494739 167 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC091951.2-201ENST00000500762 203 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 KCTD9P2-201ENST00000512203 1013 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM38O00635 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM38O00635 SNORA20.3-201ENST00000516880 132 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.24□□□□□ -1.73
TRIM38O00635 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM38O00635 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM38O00635 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
TRIM38O00635 SNORD84-203ENST00000584275 78 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AL031176.1-201ENST00000604554 466 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AL354984.3-201ENST00000604803 325 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC068276.1-201ENST00000605793 379 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC087045.1-201ENST00000605856 382 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC233309.1-201ENST00000619522 751 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC019278.1-201ENST00000623516 479 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC079597.1-201ENST00000624306 508 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC093591.3-201ENST00000634516 308 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TRIM38O00635 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 MTND5P26-201ENST00000426018 1752 ntBASIC4.24□□□□□ -1.73
TRIM38O00635 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM38O00635 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM38O00635 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM38O00635 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM38O00635 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 AL645937.1-201ENST00000641739 1652 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM38O00635 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRIM38O00635 RNU6-1155P-201ENST00000363554 107 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM38O00635 U3.20-201ENST00000390909 217 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms