Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXN3O00409 AC108032.1-201ENST00000416706 207 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 C1DP2-201ENST00000418167 426 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 MTCYBP5-201ENST00000423752 1135 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC019097.1-201ENST00000424783 735 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AL589872.1-201ENST00000426602 288 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC104651.1-201ENST00000427559 735 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN3O00409 TBCAP1-201ENST00000436520 327 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 ARPC3P1-201ENST00000437218 533 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXN3O00409 AL049734.2-201ENST00000441066 616 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.29□□□□□ -1.72
FOXN3O00409 AL359073.1-201ENST00000448036 403 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 RPS11P1-201ENST00000451072 473 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 RPL23AP41-201ENST00000484754 458 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN3O00409 AC011352.1-201ENST00000512300 793 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN3O00409 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN3O00409 Y_RNA.672-201ENST00000516289 104 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 MED28P5-201ENST00000528254 438 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC125611.2-201ENST00000551907 647 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN3O00409 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXN3O00409 COX6CP3-201ENST00000580869 223 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN3O00409 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN3O00409 AC010928.3-201ENST00000587712 541 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXN3O00409 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AL136363.2-201ENST00000604173 851 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AL022099.1-201ENST00000604551 712 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC090578.1-201ENST00000604955 591 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC007038.2-201ENST00000608095 740 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC103710.3-201ENST00000608157 948 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 MIR378J-201ENST00000611988 109 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC068137.3-201ENST00000639191 341 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 AC073869.6-201ENST00000640656 341 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
FOXN3O00409 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
FOXN3O00409 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN3O00409 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN3O00409 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXN3O00409 AC090337.1-201ENST00000579651 2074 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN3O00409 USP8P1-201ENST00000494673 3183 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN3O00409 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN3O00409 RNA5SP399-201ENST00000364003 117 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 RNA5SP130-201ENST00000364431 114 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXN3O00409 RNU6-637P-201ENST00000384050 107 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 RNU6-1181P-201ENST00000384191 106 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 RNU6-432P-201ENST00000384196 109 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 MIR1251-201ENST00000408552 70 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 RNU6-248P-201ENST00000410720 107 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC022028.1-201ENST00000412054 408 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 HMGN1P24-201ENST00000412282 298 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXN3O00409 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN3O00409 AC119618.1-201ENST00000434191 222 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 KCTD9P3-201ENST00000434597 1169 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 MTATP6P13-201ENST00000438531 667 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 USP9YP15-201ENST00000442391 422 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 MTND4P18-201ENST00000447010 465 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 RPL7P24-201ENST00000493052 752 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC093278.1-201ENST00000494700 600 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 CEACAMP10-202ENST00000495431 496 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC138853.1-201ENST00000503549 823 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN3O00409 MLLT10P2-201ENST00000506434 249 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN3O00409 SNORA31.9-201ENST00000516429 84 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 RNU2-46P-201ENST00000517038 113 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXN3O00409 OR5D17P-201ENST00000531492 978 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXN3O00409 OR4T1P-201ENST00000554933 911 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXN3O00409 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXN3O00409 RBM11P1-201ENST00000604951 799 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC068944.2-201ENST00000610373 403 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 BX664608.1-201ENST00000610519 487 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC092794.1-201ENST00000612734 582 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN3O00409 AL732618.1-201ENST00000623251 301 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC091953.2-201ENST00000623979 160 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FOXN3O00409 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN3O00409 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN3O00409 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN3O00409 AC004925.1-201ENST00000624256 2706 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 AC092447.7-201ENST00000422212 1621 ntBASIC4.28□□□□□ -1.72
FOXN3O00409 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN3O00409 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXN3O00409 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms