Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.87□□□□□ -1.63
RFXAPO00287 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.87□□□□□ -1.63
RFXAPO00287 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.87□□□□□ -1.63
RFXAPO00287 AL356432.3-201ENST00000568952 465 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 BBIP1P1-201ENST00000602999 279 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 AC121334.2-201ENST00000605387 271 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 AL022345.1-201ENST00000607292 135 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 AC022893.3-201ENST00000607665 437 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 AC020634.1-201ENST00000608701 549 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 MIR6867-201ENST00000610636 67 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 MIR6875-201ENST00000617506 72 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 AC112484.5-201ENST00000624189 228 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
RFXAPO00287 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.87□□□□□ -1.63
RFXAPO00287 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.87□□□□□ -1.63
RFXAPO00287 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.87□□□□□ -1.63
RFXAPO00287 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFXAPO00287 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFXAPO00287 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.87□□□□□ -1.63
RFXAPO00287 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 AC010300.1-201ENST00000600671 5134 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.86□□□□□ -1.63
RFXAPO00287 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
RFXAPO00287 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC112198.2-201ENST00000426589 6996 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RFXAPO00287 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 RPL23AP57-201ENST00000332361 466 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 Y_RNA.158-201ENST00000363651 101 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 RNU6-525P-201ENST00000363685 104 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 SNORD46.1-201ENST00000364139 104 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 Y_RNA.367-201ENST00000365544 101 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 SNORA11.2-201ENST00000408318 127 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 MCFD2P1-201ENST00000417812 300 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 AC092162.1-201ENST00000432828 434 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.86□□□□□ -1.63
RFXAPO00287 PRPF38AP1-201ENST00000451976 933 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 APOOP2-201ENST00000461561 539 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 GMFBP1-201ENST00000467831 427 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 MTCYBP40-201ENST00000509390 1135 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC026801.2-201ENST00000515352 425 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 AP005902.1-201ENST00000521358 186 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC027369.5-201ENST00000533838 755 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.86□□□□□ -1.63
RFXAPO00287 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.86□□□□□ -1.63
RFXAPO00287 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.86□□□□□ -1.63
RFXAPO00287 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.86□□□□□ -1.63
RFXAPO00287 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.86□□□□□ -1.63
RFXAPO00287 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFXAPO00287 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
RFXAPO00287 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
RFXAPO00287 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RFXAPO00287 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFXAPO00287 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFXAPO00287 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFXAPO00287 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RFXAPO00287 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RFXAPO00287 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.85□□□□□ -1.63
RFXAPO00287 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFXAPO00287 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFXAPO00287 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RFXAPO00287 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RFXAPO00287 RNU6-1252P-201ENST00000363054 104 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 Y_RNA.100-201ENST00000363141 102 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 RNU6-1188P-201ENST00000363795 107 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 RNU4-66P-201ENST00000365199 138 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 Y_RNA.414-201ENST00000384011 101 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 RNA5SP372-201ENST00000390836 115 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 SNORA48.4-201ENST00000391089 134 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 MRPL42P3-201ENST00000401492 326 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 RN7SKP158-201ENST00000410453 326 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.85□□□□□ -1.63
RFXAPO00287 AC010881.1-201ENST00000433830 235 ntBASIC4.85□□□□□ -1.63
RFXAPO00287 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.85□□□□□ -1.63
RFXAPO00287 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms