Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNA5SP129-201ENST00000410276 118 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 RN7SKP284-201ENST00000411002 343 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 FCF1P2-201ENST00000415284 583 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL356320.2-201ENST00000417263 507 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC079776.3-201ENST00000450665 370 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC048346.1-201ENST00000510247 144 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 RN7SKP96-201ENST00000516948 297 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 SNORA31.26-201ENST00000517250 137 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 FAM60DP-201ENST00000524174 632 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 PTP4A1P6-201ENST00000531034 478 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 MTND3P13-201ENST00000574391 343 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 YWHAQP7-201ENST00000603536 658 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 MTND3P19-201ENST00000603825 345 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC116312.1-201ENST00000606841 314 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC087821.2-201ENST00000637086 450 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC011978.2-201ENST00000569835 2054 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC073325.2-201ENST00000339545 159 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 RNU6-251P-201ENST00000363235 104 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 snoZ40.1-201ENST00000364540 72 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 MIR9-1-201ENST00000385198 89 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 SNORD65.1-201ENST00000390889 71 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 DSTNP4-201ENST00000399472 474 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC004987.3-201ENST00000413879 771 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 MTCO2P17-201ENST00000424336 677 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 NANOGP5-201ENST00000424456 877 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 MUPP-201ENST00000438111 566 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 RPL32P28-201ENST00000443577 397 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 Z99714.1-201ENST00000450463 807 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC104308.1-201ENST00000454621 333 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 MTCO3P35-201ENST00000485582 781 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC084024.2-201ENST00000503480 791 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AP002770.2-201ENST00000543613 532 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 SERPINE4P-201ENST00000554978 281 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL132857.1-201ENST00000555180 708 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 VN1R83P-201ENST00000595685 445 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC023158.2-201ENST00000614876 543 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 LINC02211-204ENST00000642024 1070 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AP005901.5-201ENST00000545779 1796 ntBASIC2.78□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-1243P-201ENST00000364028 107 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 MIR196B-201ENST00000384852 84 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 Y_RNA.578-201ENST00000390903 88 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL136310.1-201ENST00000404926 654 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU2-71P-201ENST00000411395 189 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 Z80107.1-201ENST00000436830 412 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL589880.1-201ENST00000448271 287 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 DUXAP8-207ENST00000456786 622 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPL21P131-201ENST00000497298 483 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-488P-201ENST00000515918 99 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC104986.1-201ENST00000517978 436 ntBASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TMX2-CTNND1H3BSU7 OR4A45P-201ENST00000529954 901 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms