Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AL162713.1-201ENST00000604480 262 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AL035413.2-201ENST00000604801 525 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC018645.2-201ENST00000609151 472 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 MIR6716-201ENST00000613413 80 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AP002371.2-201ENST00000624450 503 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AL138960.2-201ENST00000625145 535 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SMKR1H3BMG3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SMKR1H3BMG3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.34□□□□□ -2.04
SMKR1H3BMG3 MTND5P7-201ENST00000413558 1798 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 NACA3P-201ENST00000359690 648 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 RNU6-413P-201ENST00000384115 107 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 U8.11-201ENST00000384699 133 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 U8.12-201ENST00000384701 133 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AL049693.1-201ENST00000402760 611 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 FO393413.1-201ENST00000402892 195 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 RNU6-628P-201ENST00000410675 107 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 RNA5SP229-201ENST00000410809 99 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AL513477.1-202ENST00000417061 214 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 BX119904.4-201ENST00000424402 301 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC009414.1-201ENST00000427200 443 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 OR2B8P-201ENST00000432841 938 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC007327.1-201ENST00000447461 264 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 U8.18-201ENST00000459285 133 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LARP1BP2-201ENST00000486594 519 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC096571.1-202ENST00000506634 735 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC128657.1-201ENST00000549459 145 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 CYCSP2-201ENST00000558168 301 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 RN7SL703P-201ENST00000578485 302 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 MIR4284-201ENST00000578924 81 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 OR4K7P-201ENST00000580232 945 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AL136363.1-201ENST00000605349 337 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC103710.4-201ENST00000609301 899 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AC013476.2-201ENST00000614456 459 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AP000720.1-201ENST00000625091 483 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 AL353743.1-202ENST00000431724 1695 ntBASIC2.33□□□□□ -2.04
SMKR1H3BMG3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMKR1H3BMG3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC022336.2-201ENST00000568966 2538 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC026241.1-201ENST00000517873 2142 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 RNU5E-10P-201ENST00000363506 118 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 SNORA51.4-201ENST00000364993 124 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 RNU6-193P-201ENST00000410977 107 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 HMGN1P24-201ENST00000412282 298 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AL035423.1-201ENST00000420331 213 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC092047.1-201ENST00000424997 240 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AL390023.1-201ENST00000428836 262 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 CBWD4P-201ENST00000445695 655 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC092155.2-201ENST00000454675 477 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 RPS20P20-201ENST00000460498 340 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC104563.1-201ENST00000476147 376 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms