Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC244517.1-201ENST00000606030 2086 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AL356489.2-201ENST00000566968 3528 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 RPL32P3-201ENST00000359025 275 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 RNY4P34-201ENST00000364779 95 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-213P-201ENST00000384051 104 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 RNU1-13P-201ENST00000384499 162 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AL391417.1-201ENST00000404100 426 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 RNU2-8P-201ENST00000410727 190 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 OR4C10P-201ENST00000434991 931 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 UBDP1-202ENST00000457888 382 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 RN7SKP122-201ENST00000515923 296 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 RN7SKP209-201ENST00000516888 304 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 PDCD5P1-201ENST00000543528 309 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC011451.2-201ENST00000604303 598 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC121334.2-201ENST00000605387 271 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 LINC00901.1-201ENST00000617252 152 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 AC244205.2-202ENST00000635781 342 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 OR5AK4P-201ENST00000635912 903 ntBASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TCRBV7S3A2A0A539 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC010300.1-201ENST00000600671 5134 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC005832.2-201ENST00000538921 1430 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RNA5SP97-201ENST00000365006 84 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 SNORA70C-201ENST00000384538 135 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-114P-201ENST00000384704 105 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 CCNG1P1-201ENST00000406783 885 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RNU2-47P-201ENST00000410649 186 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RNU4-78P-201ENST00000410940 126 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 MTND1P21-201ENST00000412991 285 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC092447.6-201ENST00000414578 210 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 PIGFP2-201ENST00000421400 651 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 MTND4LP10-201ENST00000435146 291 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 HMGB3P9-201ENST00000441799 583 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AL162151.2-201ENST00000448875 158 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RPS23P1-201ENST00000491662 432 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC022483.1-201ENST00000514020 567 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-528P-201ENST00000516926 100 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC008489.1-201ENST00000524271 483 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 OR5G4P-201ENST00000525251 760 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AP000907.2-201ENST00000530827 353 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC008011.1-201ENST00000545989 227 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 CR383656.7-201ENST00000548164 174 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC027807.1-201ENST00000559921 996 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 VN1R79P-201ENST00000593540 513 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC068790.3-201ENST00000602988 553 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC011816.2-201ENST00000607089 556 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AL391813.2-201ENST00000609113 322 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC026368.1-201ENST00000614934 690 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC138649.3-201ENST00000622154 254 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AL161637.1-201ENST00000622380 412 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC091953.2-201ENST00000623979 160 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AC110994.2-201ENST00000635481 492 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms