Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MCCD1P1-208ENST00000445732 328 ntBASIC19.95■□□□□ 0.78
CDCA3Q99618 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA3Q99618 SEC1P-202ENST00000473944 940 ntBASIC19.95■□□□□ 0.78
CDCA3Q99618 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA3Q99618 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA3Q99618 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.95■□□□□ 0.78
CDCA3Q99618 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.95■□□□□ 0.78
CDCA3Q99618 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA3Q99618 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDCA3Q99618 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA3Q99618 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDCA3Q99618 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA3Q99618 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA3Q99618 AL691432.2-201ENST00000607222 2038 ntBASIC19.94■□□□□ 0.78
CDCA3Q99618 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 TSPY22P-201ENST00000427496 604 ntBASIC19.94■□□□□ 0.78
CDCA3Q99618 AP000347.1-202ENST00000435868 847 ntBASIC19.94■□□□□ 0.78
CDCA3Q99618 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDCA3Q99618 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.94■□□□□ 0.78
CDCA3Q99618 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA3Q99618 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.94■□□□□ 0.78
CDCA3Q99618 AL136038.4-201ENST00000603606 1261 ntBASIC19.94■□□□□ 0.78
CDCA3Q99618 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDCA3Q99618 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.94■□□□□ 0.78
CDCA3Q99618 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDCA3Q99618 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA3Q99618 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDCA3Q99618 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA3Q99618 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDCA3Q99618 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDCA3Q99618 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.93■□□□□ 0.78
CDCA3Q99618 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA3Q99618 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.93■□□□□ 0.78
CDCA3Q99618 AC091304.2-201ENST00000564639 760 ntBASIC19.93■□□□□ 0.78
CDCA3Q99618 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.93■□□□□ 0.78
CDCA3Q99618 AC079602.3-201ENST00000623931 403 ntBASIC19.93■□□□□ 0.78
CDCA3Q99618 AC112497.1-201ENST00000624824 639 ntBASIC19.93■□□□□ 0.78
CDCA3Q99618 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA3Q99618 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA3Q99618 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA3Q99618 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA3Q99618 AP005212.1-201ENST00000581547 1997 ntBASIC19.93■□□□□ 0.78
CDCA3Q99618 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA3Q99618 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA3Q99618 ZNF815P-204ENST00000434898 1737 ntBASIC19.93■□□□□ 0.78
CDCA3Q99618 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA3Q99618 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA3Q99618 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDCA3Q99618 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.92■□□□□ 0.78
CDCA3Q99618 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA3Q99618 AL160237.2-201ENST00000556165 472 ntBASIC19.92■□□□□ 0.78
CDCA3Q99618 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA3Q99618 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA3Q99618 MIR3917-201ENST00000580971 93 ntBASIC19.92■□□□□ 0.78
CDCA3Q99618 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.92■□□□□ 0.78
CDCA3Q99618 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA3Q99618 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDCA3Q99618 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA3Q99618 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDCA3Q99618 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.91■□□□□ 0.78
CDCA3Q99618 AL391807.1-203ENST00000604392 2365 ntBASIC19.91■□□□□ 0.78
CDCA3Q99618 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.91■□□□□ 0.78
CDCA3Q99618 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDCA3Q99618 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.91■□□□□ 0.78
CDCA3Q99618 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.91■□□□□ 0.78
CDCA3Q99618 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.91■□□□□ 0.78
CDCA3Q99618 EMBP1-201ENST00000458200 901 ntBASIC19.91■□□□□ 0.78
CDCA3Q99618 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA3Q99618 TPSP2-201ENST00000561760 610 ntBASIC19.91■□□□□ 0.78
CDCA3Q99618 AC012615.1-201ENST00000565797 1299 ntBASIC19.91■□□□□ 0.78
CDCA3Q99618 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms