Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CPSF7Q8N684 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 AC026366.1-201ENST00000488803 879 ntBASIC18.7■□□□□ 0.58
CPSF7Q8N684 AP003097.1-201ENST00000530657 1135 ntBASIC18.7■□□□□ 0.58
CPSF7Q8N684 C2orf69P4-201ENST00000565394 541 ntBASIC18.7■□□□□ 0.58
CPSF7Q8N684 AC060766.5-201ENST00000590539 871 ntBASIC18.7■□□□□ 0.58
CPSF7Q8N684 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
CPSF7Q8N684 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF7Q8N684 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 AC098590.1-201ENST00000468126 897 ntBASIC18.69■□□□□ 0.58
CPSF7Q8N684 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 HLA-B-256ENST00000639848 1089 ntBASIC18.69■□□□□ 0.58
CPSF7Q8N684 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 AL354751.1-201ENST00000412768 1863 ntBASIC18.69■□□□□ 0.58
CPSF7Q8N684 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF7Q8N684 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.69■□□□□ 0.58
CPSF7Q8N684 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.68■□□□□ 0.58
CPSF7Q8N684 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 AL512353.2-201ENST00000448759 1962 ntBASIC18.68■□□□□ 0.58
CPSF7Q8N684 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 AC128676.1-201ENST00000454392 318 ntBASIC18.68■□□□□ 0.58
CPSF7Q8N684 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF7Q8N684 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.68■□□□□ 0.58
CPSF7Q8N684 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms