Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 AC233702.5-201ENST00000584107 538 ntBASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 CD177P1-201ENST00000606252 935 ntBASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 KRT8P41-201ENST00000533985 1514 ntBASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 TSPY21P-201ENST00000433481 731 ntBASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 AC008550.1-201ENST00000511500 884 ntBASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF2Q8N5M1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 MIR718-201ENST00000390190 70 ntBASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 AP006294.2-201ENST00000641667 209 ntBASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 AL049637.2-201ENST00000641778 930 ntBASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATPAF2Q8N5M1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 RCC2P6-201ENST00000526625 1557 ntBASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 Z99916.2-201ENST00000604037 246 ntBASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 AC113410.3-201ENST00000623366 203 ntBASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF2Q8N5M1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.6■□□□□ 0.73
ATPAF2Q8N5M1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF2Q8N5M1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF2Q8N5M1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF2Q8N5M1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.6■□□□□ 0.73
ATPAF2Q8N5M1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATPAF2Q8N5M1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms