Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 AL157384.1-201ENST00000445995 2473 ntBASIC21.17■□□□□ 0.98
CD4P01730 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.16■□□□□ 0.98
CD4P01730 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.16■□□□□ 0.98
CD4P01730 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.16■□□□□ 0.98
CD4P01730 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 MIR4674-201ENST00000582457 87 ntBASIC21.16■□□□□ 0.98
CD4P01730 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CD4P01730 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.16■□□□□ 0.98
CD4P01730 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
CD4P01730 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD4P01730 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CD4P01730 AC009237.14-201ENST00000609975 1594 ntBASIC21.15■□□□□ 0.98
CD4P01730 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CD4P01730 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.15■□□□□ 0.98
CD4P01730 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CD4P01730 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 HBZP1-201ENST00000354915 429 ntBASIC21.15■□□□□ 0.98
CD4P01730 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.15■□□□□ 0.98
CD4P01730 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CD4P01730 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.15■□□□□ 0.98
CD4P01730 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CD4P01730 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD4P01730 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
CD4P01730 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CD4P01730 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD4P01730 AL391422.3-201ENST00000603791 2761 ntBASIC21.14■□□□□ 0.98
CD4P01730 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CD4P01730 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CD4P01730 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD4P01730 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CD4P01730 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CD4P01730 LINC01521-201ENST00000504184 1943 ntBASIC21.14■□□□□ 0.98
CD4P01730 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
CD4P01730 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.14■□□□□ 0.97
CD4P01730 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.14■□□□□ 0.97
CD4P01730 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.14■□□□□ 0.97
CD4P01730 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.14■□□□□ 0.97
CD4P01730 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.14■□□□□ 0.97
CD4P01730 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 AC092119.3-201ENST00000612618 583 ntBASIC21.14■□□□□ 0.97
CD4P01730 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CD4P01730 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD4P01730 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.14■□□□□ 0.97
CD4P01730 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.13■□□□□ 0.97
CD4P01730 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.13■□□□□ 0.97
CD4P01730 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.13■□□□□ 0.97
CD4P01730 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CD4P01730 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.13■□□□□ 0.97
CD4P01730 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 AC246785.2-201ENST00000432512 513 ntBASIC21.13■□□□□ 0.97
CD4P01730 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.13■□□□□ 0.97
CD4P01730 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.13■□□□□ 0.97
CD4P01730 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD4P01730 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.13■□□□□ 0.97
CD4P01730 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms