Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn20G5E8X0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn20G5E8X0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Mir1199-201ENSMUST00000117015 119 ntBASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn20G5E8X0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cldn20G5E8X0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms