Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.83□□□□□ -1.64
HCFC2Q9Y5Z7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCFC2Q9Y5Z7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.83□□□□□ -1.64
HCFC2Q9Y5Z7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCFC2Q9Y5Z7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCFC2Q9Y5Z7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 RNU6-552P-201ENST00000362869 119 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 Y_RNA.187-201ENST00000363918 113 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 RNA5SP366-201ENST00000365454 123 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 Y_RNA.414-201ENST00000384011 101 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AL583835.1-201ENST00000399570 407 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC005517.2-201ENST00000424673 553 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 COX6CP15-201ENST00000426313 211 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 PHBP16-201ENST00000446318 950 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC104073.1-201ENST00000451988 151 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 RNU7-66P-201ENST00000459469 62 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AP001992.1-205ENST00000462248 379 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AL049714.1-201ENST00000466686 347 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 RNU6-1046P-201ENST00000516538 107 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 RPL23AP53-201ENST00000521854 457 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AP003730.1-201ENST00000524605 285 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 MIR4775-201ENST00000581168 75 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC006006.1-201ENST00000603082 144 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC124312.5-201ENST00000604451 268 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC103710.2-201ENST00000609912 942 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 MIR3653-201ENST00000625572 110 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 RNA5SP196-201ENST00000625967 102 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 MTND4LP32-201ENST00000636111 270 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AC121333.1-201ENST00000567488 2709 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AL138713.1-201ENST00000624026 2130 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 NXPH1-205ENST00000602349 1953 ntBASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
HCFC2Q9Y5Z7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 RNU1-94P-201ENST00000362627 173 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 RNU4-66P-201ENST00000365199 138 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 RNY3P13-201ENST00000365542 102 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC117470.1-201ENST00000381974 330 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 SNORA22B-201ENST00000383876 138 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 RNU6-39P-201ENST00000384344 107 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 SNORA11F-201ENST00000408237 128 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 MIR548K-201ENST00000408406 116 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 EZH2P1-201ENST00000431167 291 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC104308.1-201ENST00000454621 333 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC108059.3-201ENST00000456388 214 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 RNU6-347P-201ENST00000516658 105 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 NARSP2-201ENST00000518524 679 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC068993.1-201ENST00000546724 589 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 LSM3P2-201ENST00000551246 273 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC006349.1-201ENST00000555526 235 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 MIR3668-201ENST00000582138 75 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 APOOP1-201ENST00000604695 592 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AL121992.2-201ENST00000606262 256 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC245517.5-201ENST00000611529 162 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AC007546.1-201ENST00000619452 559 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 AP001350.1-201ENST00000601906 1524 ntBASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCFC2Q9Y5Z7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 ADAM5-202ENST00000399789 1942 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms