Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC134698.5-201ENST00000519444 336 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC123904.3-201ENST00000547218 814 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC025884.1-201ENST00000556034 378 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC055876.1-202ENST00000567053 138 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AP001029.3-201ENST00000588063 596 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 FAM27D1-201ENST00000612308 341 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU1-94P-201ENST00000362627 173 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU6-1284P-201ENST00000363701 100 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 U3.11-201ENST00000364476 212 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 Y_RNA.582-201ENST00000391023 95 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 RPS26P8-201ENST00000393490 348 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 HLA-N-201ENST00000437516 135 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL049714.1-201ENST00000466686 347 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AP001086.1-201ENST00000494882 321 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU2-10P-201ENST00000516375 211 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 CYP4A43P-201ENST00000568156 121 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 MTND1P15-201ENST00000579262 949 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL606834.2-201ENST00000602954 668 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL161729.3-201ENST00000603533 673 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC090425.2-201ENST00000608818 501 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL031666.3-201ENST00000609320 1006 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 Z99129.1-201ENST00000612510 255 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC013476.2-201ENST00000614456 459 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC015540.1-201ENST00000615828 501 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 MIR8059-201ENST00000620427 81 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 AC092447.7-201ENST00000422212 1621 ntBASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A3BPQ9Y5P4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 RN7SKP227-201ENST00000364445 330 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU4-75P-201ENST00000364621 146 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 RPS3AP36-201ENST00000398190 775 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 RPL23AP48-201ENST00000406913 488 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 PIGFP2-201ENST00000421400 651 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 BTF3P10-201ENST00000433415 495 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 CYCSP43-201ENST00000438233 310 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC138853.1-201ENST00000503549 823 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 KCTD9P5-201ENST00000504141 1170 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC006499.6-201ENST00000511169 607 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC114797.1-201ENST00000514003 728 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 RN7SKP21-201ENST00000516503 220 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC093012.1-202ENST00000549403 582 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 MIR3913-1-201ENST00000577744 102 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 BNIP3P33-201ENST00000598912 569 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 BDH2P1-201ENST00000602288 736 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC078795.2-201ENST00000602835 1252 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AL136363.2-201ENST00000604173 851 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms