Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AP003717.3-201ENST00000544832 1180 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AC093014.1-201ENST00000548926 724 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 PCNAP1-202ENST00000595299 752 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AC092474.3-201ENST00000603022 568 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AC012468.1-201ENST00000604888 430 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 KATNBL1P1-201ENST00000605192 748 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 OR1S1-201ENST00000624470 978 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 AC110079.1-202ENST00000635213 138 ntBASIC1.8□□□□□ -2.12
AP4S1Q9Y587 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
AP4S1Q9Y587 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 RNA5SP289-201ENST00000362332 137 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 XGY1-201ENST00000381172 446 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 PPP1R2P5-201ENST00000457256 603 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC078857.1-201ENST00000469870 667 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 RPS3AP14-201ENST00000483907 780 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 FAM172BP-201ENST00000487497 1089 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC016550.3-201ENST00000515706 767 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 MTND4LP24-201ENST00000572277 291 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 MIR7106-201ENST00000612419 65 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 CR589904.2-201ENST00000612533 440 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 MFSD8-245ENST00000641743 948 ntBASIC1.79□□□□□ -2.12
AP4S1Q9Y587 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.79□□□□□ -2.12
AP4S1Q9Y587 ZNF37BP-203ENST00000452306 1352 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AL356057.1-202ENST00000402263 756 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 SNORA81-201ENST00000408493 178 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AC234782.4-201ENST00000417646 1048 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 ELOCP3-201ENST00000439303 348 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 SDCBPP1-201ENST00000440192 890 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 TPT1P14-201ENST00000448018 505 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AL139109.1-201ENST00000455491 297 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 SYPL1P1-201ENST00000473622 768 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AC034244.2-201ENST00000514668 858 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 RN7SKP31-201ENST00000516354 278 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 SNORA31.20-201ENST00000517111 133 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AP001646.1-201ENST00000527936 915 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AC026464.5-201ENST00000562497 722 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 DNAJC19P3-201ENST00000594491 331 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 AC009570.1-201ENST00000609599 745 ntBASIC1.78□□□□□ -2.12
AP4S1Q9Y587 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
AP4S1Q9Y587 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
AP4S1Q9Y587 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 ZNF519P1-201ENST00000449011 1626 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 RNU6-697P-201ENST00000363348 107 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AL450338.1-201ENST00000407987 512 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 RNU2-20P-201ENST00000410425 191 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 NUP35P2-201ENST00000416748 943 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 RPL7P44-201ENST00000424827 742 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 MTCO3P11-201ENST00000455103 774 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AP002371.1-201ENST00000463604 433 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 RPS29P20-201ENST00000489592 171 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 HMGB1P46-201ENST00000520062 610 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 OR4V1P-201ENST00000525394 1140 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AC126177.3-201ENST00000551839 688 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 GTF2IP8-201ENST00000560687 584 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AC053481.3-201ENST00000577881 843 ntBASIC1.77□□□□□ -2.13
AP4S1Q9Y587 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.77□□□□□ -2.13
AP4S1Q9Y587 OR1M4P-201ENST00000589199 287 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms