Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC097493.1-201ENST00000463958 372 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 FAM172BP-201ENST00000487497 1089 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC093281.2-201ENST00000510153 597 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC011602.1-201ENST00000546484 331 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AL845331.3-202ENST00000562856 261 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC007179.3-201ENST00000604976 235 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC107952.2-201ENST00000606048 486 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC095031.1-201ENST00000623685 672 ntBASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.17□□□□□ -1.9
ATG4BQ9Y4P1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL591034.1-201ENST00000407447 340 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC005019.1-201ENST00000436455 431 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 SDCBPP1-201ENST00000440192 890 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL591719.1-201ENST00000444669 744 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 Z73417.1-201ENST00000447373 778 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 SSXP4-201ENST00000451349 245 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 RNU7-136P-201ENST00000458819 69 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 RPL21P10-201ENST00000463521 490 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 RPS27AP1-201ENST00000475545 471 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL358832.1-201ENST00000497800 389 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 DEFB131D-201ENST00000526803 184 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 UBE2NP1-201ENST00000545592 458 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 NCAPGP2-201ENST00000557911 754 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 CYCSP2-201ENST00000558168 301 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AP005205.1-201ENST00000563503 508 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC090615.1-201ENST00000577519 154 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 DUXAP11-201ENST00000603858 526 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AP001330.4-201ENST00000604350 154 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC012468.1-201ENST00000604888 430 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC012443.1-201ENST00000605605 231 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL356321.1-201ENST00000621360 228 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AC011330.2-201ENST00000621680 635 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL445264.1-201ENST00000621719 171 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 PLCE1P1-201ENST00000622094 305 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 AL513185.3-201ENST00000433335 1300 ntBASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATG4BQ9Y4P1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.9
ATG4BQ9Y4P1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 RPL7P26-201ENST00000333817 754 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 RNA5SP387-201ENST00000364226 106 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 RNU6-882P-201ENST00000391025 103 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 RNU2-47P-201ENST00000410649 186 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 HMGB3P23-201ENST00000414981 585 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 HIGD1AP15-201ENST00000416198 280 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 YPEL5P1-201ENST00000419731 367 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC079780.1-201ENST00000428259 207 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 USP9YP10-201ENST00000454868 628 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC010401.1-201ENST00000463867 348 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms