Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AL359955.1-201ENST00000455242 3275 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC079741.1-201ENST00000321498 212 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AL159987.1-201ENST00000347911 293 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-874P-201ENST00000362390 105 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-715P-201ENST00000365204 103 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 RN7SKP17-201ENST00000411242 351 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 RPS15AP40-201ENST00000419621 391 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC243428.1-201ENST00000421099 264 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AL591704.1-201ENST00000432574 275 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 GAPDHP27-201ENST00000447427 1020 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 SDC4P-201ENST00000453285 601 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 snoU13.1-201ENST00000459157 104 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 PPIAP21-201ENST00000464473 501 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 IGLV2-34-201ENST00000490007 283 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 RNA5SP384-201ENST00000516615 116 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 RNU4-77P-201ENST00000516692 156 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC069307.1-201ENST00000602820 447 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AL355812.1-201ENST00000603215 216 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 MIR6780A-201ENST00000615089 68 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC090607.5-201ENST00000615692 224 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AL589994.2-201ENST00000621124 579 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AP001005.3-201ENST00000622049 129 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC110801.1-201ENST00000623590 212 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 STX3-208ENST00000641815 3236 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 AC093849.1-201ENST00000563631 2209 ntBASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.67□□□□□ -1.5
HCN4Q9Y3Q4 MFSD8-216ENST00000641147 4009 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 RNU1-64P-201ENST00000365443 163 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 Y_RNA.552-201ENST00000384665 112 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-55P-201ENST00000411092 107 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 USP9YP30-201ENST00000430729 455 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 MRPS18BP2-201ENST00000434310 759 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC099799.1-201ENST00000439809 192 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AL359672.1-201ENST00000442302 409 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 NOTCH2P1-201ENST00000443481 624 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 PCNPP5-201ENST00000452246 481 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC112492.4-201ENST00000456549 352 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 RN7SL570P-201ENST00000484405 292 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC096745.1-201ENST00000509945 370 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC012400.1-201ENST00000518452 381 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 MIR4298-201ENST00000584380 73 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AL161423.1-201ENST00000613700 262 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 TUG1_2.1-201ENST00000614234 87 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 MIR8062-201ENST00000621515 85 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AL606534.2-204ENST00000635008 178 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 MIR6830-201ENST00000636015 70 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 CYP4F35P-202ENST00000636121 390 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 AC000095.2-202ENST00000637415 154 ntBASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HCN4Q9Y3Q4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms