Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC087312.1-201ENST00000471411 480 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 HMGB1P36-201ENST00000487709 576 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 RPL29P14-201ENST00000495837 428 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 SNORA70.14-201ENST00000516205 110 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL157394.1-201ENST00000562983 1224 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL360157.1-201ENST00000565962 87 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC120057.2-201ENST00000571520 271 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 MIR4444-1-201ENST00000581696 74 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 MIR4444-2-201ENST00000584390 74 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL390208.1-201ENST00000605885 644 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL158209.2-201ENST00000619266 216 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC136475.10-201ENST00000620253 385 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC124864.2-201ENST00000624736 186 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 PISRT1-201ENST00000626175 531 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AL049780.3-201ENST00000624612 1583 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC004520.1-201ENST00000608362 1413 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
SSX2IPQ9Y2D8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC090229.1-201ENST00000590983 1609 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 RNU6-28P-201ENST00000362378 107 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 RNU6-343P-201ENST00000364709 104 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 RNY4P34-201ENST00000364779 95 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 Y_RNA.554-201ENST00000384672 102 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 FCF1P10-201ENST00000407590 479 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 RNU4-6P-201ENST00000410804 122 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC006011.1-201ENST00000442758 349 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC003071.1-201ENST00000451219 789 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 HMGB1P15-201ENST00000453854 435 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 RPS20P21-201ENST00000466859 343 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 KCTD9P5-201ENST00000504141 1170 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC108078.1-201ENST00000508073 725 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 TXNP6-201ENST00000510190 310 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 RNU6-718P-201ENST00000516166 105 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC092470.1-201ENST00000546187 132 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC063950.1-201ENST00000552036 308 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AL161713.1-201ENST00000555538 145 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AL391840.1-201ENST00000571144 367 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 CKS1BP3-201ENST00000600888 237 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AL592436.1-201ENST00000605135 558 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 HMGB1P50-201ENST00000605814 607 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC022306.2-201ENST00000617563 647 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC110994.2-201ENST00000635481 492 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 FAM157B-203ENST00000639350 358 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 AC092447.10-201ENST00000620607 1652 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 MAPK10-372ENST00000641954 3413 ntBASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX2IPQ9Y2D8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 ELF2P3-201ENST00000445099 1506 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 MIR670-201ENST00000390142 98 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 RPS20P2-201ENST00000402520 389 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 BTBD10P2-201ENST00000404779 676 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms