Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 USP9YP13-201ENST00000417797 480 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AIMP1P1-201ENST00000418670 937 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 REREP1Y-201ENST00000422655 198 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC009965.2-201ENST00000425328 970 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 REREP2Y-201ENST00000439103 200 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 RNU7-27P-201ENST00000459281 62 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 RPS20P20-201ENST00000460498 340 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC017015.1-201ENST00000477387 286 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC098583.1-201ENST00000480875 255 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 RPS26P24-201ENST00000497656 331 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 VN1R104P-201ENST00000505115 1009 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC079140.5-201ENST00000507882 310 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 RNU6-388P-201ENST00000517012 105 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 RNU6-389P-201ENST00000517048 105 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC090151.1-201ENST00000520784 730 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC025678.1-201ENST00000567861 338 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AL596327.1-201ENST00000603629 213 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 SNORD91B-202ENST00000608459 222 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC103710.1-201ENST00000610003 901 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AC145207.9-201ENST00000623802 325 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 MKKS-204ENST00000639674 192 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AP004289.2-201ENST00000444413 1457 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 MARK2P15-201ENST00000432204 2186 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 Y_RNA.166-201ENST00000363730 102 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 RNU6-379P-201ENST00000363813 104 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 RNA5SP51-201ENST00000364750 119 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 RNU6-619P-201ENST00000365146 108 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 RNU6-43P-201ENST00000384302 107 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 SNORA40.3-201ENST00000390964 122 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 RNU6-248P-201ENST00000410720 107 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AL353678.1-201ENST00000422735 741 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AL358472.1-201ENST00000431295 329 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 UBE2V1P5-201ENST00000440070 405 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 Y_RNA.639-201ENST00000458981 102 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC012123.2-201ENST00000485809 248 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC108078.3-201ENST00000502633 489 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 CYCSP28-201ENST00000534284 321 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC008638.3-201ENST00000603341 463 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC245014.2-201ENST00000603689 287 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC246785.4-201ENST00000605374 287 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AC040168.1-201ENST00000623594 991 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 TAB3P1-202ENST00000452645 1634 ntBASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL17A1Q9UMD9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 MAPK10-286ENST00000641208 8747 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 SNORA22B-201ENST00000383876 138 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 MTCYBP36-201ENST00000404146 440 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 GSTA9P-201ENST00000406231 611 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 SNX5P1-201ENST00000505757 1041 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AC124068.1-201ENST00000563131 678 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AC005357.1-201ENST00000588399 301 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AC091488.1-201ENST00000604239 660 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AC022893.3-201ENST00000607665 437 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AC233263.6-201ENST00000631132 1963 ntBASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL17A1Q9UMD9 AL672167.1-205ENST00000641112 3080 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 RNU6-492P-201ENST00000363035 104 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms