Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RN7SL652P-201ENST00000577769 300 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AL121992.2-201ENST00000606262 256 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC015813.4-201ENST00000610469 179 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC083809.1-201ENST00000615051 472 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 BMS1P21-201ENST00000634565 365 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 GABPAP-201ENST00000419271 1356 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 RNU6-712P-201ENST00000410558 100 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 RPL21P24-201ENST00000413752 448 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 RPL18P10-201ENST00000425606 538 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 RPL36AP6-201ENST00000435770 321 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 CBWD4P-201ENST00000445695 655 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 CACYBPP2-201ENST00000453625 678 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 NCAPGP2-201ENST00000557911 754 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 AC105129.1-201ENST00000560250 297 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 ATP5J2P6-201ENST00000565203 266 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 MIR4284-201ENST00000578924 81 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 MIR6758-201ENST00000620653 63 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 MIR6715B-201ENST00000637172 77 ntBASIC5.35□□□□□ -1.55
DDX41Q9UJV9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DDX41Q9UJV9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC092435.4-201ENST00000623012 4159 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 RNU6-1284P-201ENST00000363701 100 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 RNU6-694P-201ENST00000364071 147 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 MIR129-1-201ENST00000384972 72 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 U3.22-201ENST00000391120 215 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AL591848.1-201ENST00000413092 322 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC009161.1-201ENST00000417306 376 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC140479.3-201ENST00000418944 1126 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 SDCBPP3-201ENST00000419629 891 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 MTATP6P16-201ENST00000434543 526 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 ARL2BPP10-201ENST00000446487 531 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 RPL38P4-201ENST00000502376 214 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 MTND3P22-201ENST00000510932 243 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 MTCO1P35-201ENST00000515270 228 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC100870.1-201ENST00000522035 505 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC123904.3-201ENST00000547218 814 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 ARL2BPP2-201ENST00000550907 489 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 SNORD84-203ENST00000584275 78 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC018638.8-201ENST00000588755 281 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC012669.1-201ENST00000603209 283 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC233309.1-201ENST00000619522 751 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 AC055839.1-201ENST00000634467 498 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 U6.114-201ENST00000636407 96 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 MIR4275-201ENST00000636486 87 ntBASIC5.34□□□□□ -1.55
DDX41Q9UJV9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.34□□□□□ -1.55
DDX41Q9UJV9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
DDX41Q9UJV9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
DDX41Q9UJV9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
DDX41Q9UJV9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RIOK3P1-201ENST00000418778 1528 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 MAPK10-286ENST00000641208 8747 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms