Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 MTCYBP34-201ENST00000439552 670 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AL133217.1-201ENST00000450980 425 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 VN1R17P-201ENST00000472048 1090 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 RPS4XP13-201ENST00000483219 789 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC093767.1-201ENST00000504523 156 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 OR5AP1P-201ENST00000529730 940 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 ELOCP32-201ENST00000548625 324 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC008015.1-201ENST00000555505 465 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 MAGOH2P-202ENST00000584384 429 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC106791.2-201ENST00000604680 391 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AL592295.2-201ENST00000612578 206 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 AC103706.2-201ENST00000638080 240 ntBASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NLGN3Q9NZ94 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NLGN3Q9NZ94 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.88
NLGN3Q9NZ94 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NLGN3Q9NZ94 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC007256.1-201ENST00000392253 2765 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 Y_RNA.111-201ENST00000363248 100 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 RNA5SP42-201ENST00000364278 115 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 SNORD82-201ENST00000365530 70 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 RPL31P1-201ENST00000398116 372 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AL136116.1-201ENST00000403591 381 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 USP9YP33-201ENST00000412220 421 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AL953862.1-201ENST00000423016 168 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AL158071.1-201ENST00000430315 461 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 USP9YP35-201ENST00000435696 412 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 EEF1E1P1-201ENST00000446998 430 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 USP9YP34-201ENST00000453983 808 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC093281.2-201ENST00000510153 597 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC109635.4-202ENST00000531666 412 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 TGIF1P1-201ENST00000558095 802 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC002400.1-201ENST00000569310 726 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC012182.1-201ENST00000570133 895 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 MIR3690-201ENST00000580266 75 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 BNIP3P24-201ENST00000593398 557 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 CKS1BP3-201ENST00000600888 237 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC006539.2-201ENST00000601729 572 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC018714.1-201ENST00000605028 208 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC090425.2-201ENST00000608818 501 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC068057.2-201ENST00000624047 895 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NLGN3Q9NZ94 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 RNU6-989P-201ENST00000362756 107 ntBASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 RNU6-629P-201ENST00000384061 103 ntBASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 SNORA48.5-201ENST00000391143 135 ntBASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 CYCSP45-201ENST00000402289 315 ntBASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 AL583834.1-201ENST00000406943 343 ntBASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 RNU2-71P-201ENST00000411395 189 ntBASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.32□□□□□ -1.88
NLGN3Q9NZ94 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms