Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RPL21P93-201ENST00000480465 489 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC233702.1-201ENST00000482905 502 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC087190.1-201ENST00000484462 480 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC098799.1-201ENST00000504752 800 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC010460.2-201ENST00000509054 677 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 SNORA70.16-201ENST00000516390 95 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC104417.1-201ENST00000523974 751 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 MTCO3P15-201ENST00000526563 574 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 NBEAP1-201ENST00000554452 979 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC055876.1-202ENST00000567053 138 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 MTND4LP25-201ENST00000570218 163 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 MAGOH2P-202ENST00000584384 429 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 HSPE1P7-201ENST00000604681 321 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC010975.3-201ENST00000618727 978 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC109454.4-201ENST00000623411 649 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 TAB3P1-202ENST00000452645 1634 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 OR4G11P-202ENST00000642116 1414 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 RPL7P25-201ENST00000404151 721 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AC019070.1-201ENST00000415008 1024 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 RPL7P10-201ENST00000417407 739 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AL645937.1-202ENST00000421799 937 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 HMGN2P30-201ENST00000423237 256 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 DPRXP1-201ENST00000426312 460 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 ARF4P4-201ENST00000439608 520 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 SNRPGP6-201ENST00000451124 220 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AP001189.2-201ENST00000527320 189 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AC007536.1-201ENST00000533382 349 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 MIR5004-201ENST00000579078 107 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 RPL23AP78-201ENST00000599928 470 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AL035411.2-201ENST00000604022 421 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AL158211.2-201ENST00000607282 395 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AP002826.1-201ENST00000608835 315 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AC018926.1-201ENST00000616335 435 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AC002064.3-201ENST00000623448 346 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AC026422.1-201ENST00000623961 452 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 MKKS-204ENST00000639674 192 ntBASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.88□□□□□ -1.95
KLHL28Q9NXS3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 SNORD56.5-201ENST00000364281 72 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AL603865.2-201ENST00000401679 213 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RNU2-47P-201ENST00000410649 186 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RN7SKP58-201ENST00000411010 305 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RPS7P9-201ENST00000414704 586 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RPL23AP74-201ENST00000437246 471 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 MUPP-201ENST00000438111 566 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RPS3AP43-201ENST00000479743 781 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 COX7A2P2-201ENST00000505291 250 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 NAMPTP2-201ENST00000505629 1115 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC008837.1-201ENST00000511513 412 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms