Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AP003465.2-201ENST00000602571 373 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL049634.3-201ENST00000604968 457 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC010201.1-201ENST00000605051 540 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC126118.1-201ENST00000607744 628 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC110801.1-201ENST00000623590 212 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 CR381653.2-201ENST00000624041 768 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC116667.1-201ENST00000604855 2072 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC012020.1-201ENST00000624541 1728 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 MFSD8-242ENST00000641690 4199 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC125257.1-201ENST00000560400 2930 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 ZNF137P-201ENST00000456718 1920 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AL133243.3-201ENST00000617415 3004 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 OR4K15-201ENST00000305051 1216 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AL590240.1-201ENST00000334118 313 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 Y_RNA.159-201ENST00000363674 87 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 RNU6-108P-201ENST00000365558 107 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 RNU5E-6P-201ENST00000365574 115 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 RNA5SP151-201ENST00000365632 117 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 Y_RNA.409-201ENST00000383990 98 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 RPL17P50-201ENST00000396131 546 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 SDHCP2-201ENST00000398565 501 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 CALM2P3-201ENST00000400429 449 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 MIR548F1-201ENST00000408667 84 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 UQCRBP1-201ENST00000421129 336 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 EIF1P3-201ENST00000423841 334 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 MTCO2P19-201ENST00000427513 598 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 OR2AS1P-201ENST00000427827 319 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC093106.2-201ENST00000428212 385 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AL513533.1-201ENST00000453728 415 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 RAD23BP3-201ENST00000454157 1152 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC093899.1-201ENST00000457984 376 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC106872.2-201ENST00000494303 480 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC006499.6-201ENST00000511169 607 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 MYL12AP1-201ENST00000518490 515 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC136619.2-201ENST00000563361 631 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 RN7SL690P-201ENST00000582087 240 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 BDH2P1-201ENST00000602288 736 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 BPIFA4P-203ENST00000603168 689 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AP002360.4-201ENST00000606980 481 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC092954.2-201ENST00000609103 430 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 MIR6780A-201ENST00000615089 68 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 FRG1KP-201ENST00000623592 341 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC009161.2-201ENST00000624626 138 ntBASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.72□□□□□ -1.81
LIN7CQ9NUP9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.71□□□□□ -1.81
LIN7CQ9NUP9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIN7CQ9NUP9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LIN7CQ9NUP9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIN7CQ9NUP9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIN7CQ9NUP9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
LIN7CQ9NUP9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms