Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MRPS36P3-201ENST00000519284 130 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AP003497.1-201ENST00000528472 562 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 MIR4999-201ENST00000585029 91 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-1214P-201ENST00000363650 109 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC109780.2-201ENST00000413467 845 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC233728.2-201ENST00000425348 757 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC092017.2-201ENST00000427600 362 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AL365396.1-201ENST00000430854 671 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 RPL35AP22-201ENST00000436855 335 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AL357552.1-201ENST00000445254 415 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC092754.2-201ENST00000463506 460 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AP000563.1-201ENST00000490865 758 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC103843.2-201ENST00000530523 682 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AL020997.2-201ENST00000602607 184 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC110741.2-201ENST00000605278 268 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC024560.3-201ENST00000608482 349 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AC009570.1-201ENST00000609599 745 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AL139418.1-201ENST00000613613 177 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 AP000676.4-201ENST00000624659 623 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 ZNF542P-204ENST00000482727 1305 ntBASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.88□□□□□ -1.79
BLOC1S4Q9NUP1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL356274.2-201ENST00000624379 3752 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 MIR423-201ENST00000362201 94 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 RNU5A-1-201ENST00000362698 116 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-777P-201ENST00000364265 104 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 SNORA1.3-201ENST00000384676 136 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 MIR493-201ENST00000385254 89 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 SNORD17-201ENST00000390930 237 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 RSL24D1P4-201ENST00000400938 484 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL590383.1-201ENST00000428602 75 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL158071.1-201ENST00000430315 461 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 HSPD1P21-201ENST00000436541 245 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 RPL26P6-201ENST00000440913 438 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL591503.2-201ENST00000442314 1005 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 RPL21P23-201ENST00000446654 460 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC025518.1-201ENST00000479856 347 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL163153.1-201ENST00000554223 283 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 ISCA1P3-201ENST00000577104 373 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC011260.1-201ENST00000578420 472 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL034351.1-201ENST00000605288 668 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC008962.1-201ENST00000605729 304 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 MIR8058-201ENST00000615737 89 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 MIR6076-201ENST00000617521 113 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL607023.1-201ENST00000620045 248 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC006111.3-201ENST00000622137 383 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC008443.7-201ENST00000622195 246 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC243312.2-201ENST00000623340 601 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AL356596.1-201ENST00000624230 379 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms