Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 AC008725.1-201ENST00000605123 2263 ntBASIC3.56□□□□□ -1.84
HINT3Q9NQE9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HINT3Q9NQE9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AP001486.2-201ENST00000561652 5113 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 RNA5SP399-201ENST00000364003 117 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 RNU6-1074P-201ENST00000383995 104 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 RN7SKP33-201ENST00000410942 340 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 MTND1P21-201ENST00000412991 285 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 RPL7AP73-201ENST00000413490 353 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 HMGB3P23-201ENST00000414981 585 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 OR5BE1P-201ENST00000425977 939 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 TPT1P14-201ENST00000448018 505 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 KLF3P2-201ENST00000465138 268 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC010285.1-201ENST00000470580 392 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 MTND1P3-201ENST00000484956 952 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC078918.1-201ENST00000498515 228 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 MED28P5-201ENST00000528254 438 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC135001.1-201ENST00000544546 283 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AP001429.1-201ENST00000602568 530 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC090578.1-201ENST00000604955 591 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC121334.2-201ENST00000605387 271 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AL591034.3-201ENST00000605511 685 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 Z99129.1-201ENST00000612510 255 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AL589743.7-201ENST00000612637 233 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 ZYXP1-201ENST00000617638 118 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC009268.2-201ENST00000621925 457 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC112484.5-201ENST00000624189 228 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AL159972.1-201ENST00000625150 448 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC244258.1-201ENST00000637553 1071 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AL392088.2-201ENST00000637607 285 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 OR5BE1P-202ENST00000641168 1176 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 AC004925.1-201ENST00000624256 2706 ntBASIC3.55□□□□□ -1.84
HINT3Q9NQE9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.55□□□□□ -1.84
HINT3Q9NQE9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 MIR19A-201ENST00000384878 82 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 RNA5SP317-201ENST00000410176 116 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 RNA5SP311-201ENST00000411290 116 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 SSXP9-201ENST00000417503 292 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC092017.2-201ENST00000427600 362 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 RPL7P28-201ENST00000437739 740 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 NPM1P49-201ENST00000448027 714 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 GAPDHP17-201ENST00000449858 1001 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.54□□□□□ -1.84
HINT3Q9NQE9 RN7SKP298-201ENST00000515950 94 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 Y_RNA.672-201ENST00000516289 104 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 RNA5SP315-201ENST00000516340 116 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 SNORA18.6-201ENST00000516792 115 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 RNU2-46P-201ENST00000517038 113 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 RNA5SP312-201ENST00000517068 116 ntBASIC3.54□□□□□ -1.84
HINT3Q9NQE9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms