Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 UBE2V1P8-201ENST00000437166 265 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 RPL29P29-201ENST00000448725 423 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC087312.1-201ENST00000471411 480 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 MTND1P3-201ENST00000484956 952 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 RPL29P14-201ENST00000495837 428 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC108078.1-201ENST00000508073 725 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 MTCYBP41-201ENST00000528913 1123 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AP003181.2-201ENST00000528941 181 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC025627.2-201ENST00000576220 160 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 VN1R79P-201ENST00000593540 513 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 CKS1BP3-201ENST00000600888 237 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AL139286.1-201ENST00000604465 483 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC128687.2-201ENST00000609657 566 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AL136964.1-201ENST00000622038 2990 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 MTND5P33-201ENST00000571250 1450 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 Y_RNA.234-201ENST00000364409 97 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 Y_RNA.548-201ENST00000384656 105 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 RPS3AP36-201ENST00000398190 775 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AL356421.1-201ENST00000403255 413 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 RN7SKP159-201ENST00000410657 292 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 CYP4F29P-201ENST00000420685 446 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AL353777.1-201ENST00000425552 326 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 ISCA1P1-201ENST00000426679 387 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 RPL7P2-201ENST00000427639 268 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 PSMA2P3-201ENST00000429685 675 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 MRPS10P2-201ENST00000431226 381 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 RBMX2P4-201ENST00000441256 376 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 FGF7P6-202ENST00000451282 293 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 FABP3P2-201ENST00000453169 399 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 HMGB1P15-201ENST00000453854 435 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 RN7SL604P-201ENST00000492589 296 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC024224.1-201ENST00000538284 609 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC006960.3-201ENST00000561845 705 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 LLPHP1-201ENST00000603571 367 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC072046.2-201ENST00000618366 268 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 AC124864.2-201ENST00000624736 186 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 MTCO1P24-201ENST00000515438 1558 ntBASIC4.13□□□□□ -1.75
USP29Q9HBJ7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP29Q9HBJ7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 PABPC1P7-201ENST00000413177 1513 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 SNORA60-201ENST00000362396 134 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 RNY4P34-201ENST00000364779 95 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 SNORA62.3-201ENST00000365110 153 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms