Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 PABPC1P3-201ENST00000469174 459 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC108734.3-201ENST00000481241 1165 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AP001025.2-201ENST00000490908 477 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC020699.1-201ENST00000505161 445 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 MTCO3P44-201ENST00000510977 541 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC005832.3-201ENST00000537929 631 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 TRAV37-201ENST00000553906 342 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AADACP1-206ENST00000561502 1193 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AP001269.3-201ENST00000588718 329 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC083760.1-201ENST00000589621 670 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AL355493.4-201ENST00000618530 292 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC006386.1-201ENST00000619436 415 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC006111.3-201ENST00000622137 383 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC006963.1-201ENST00000624003 1052 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC006386.2-201ENST00000624491 75 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC012005.1-201ENST00000624575 75 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC099786.3-201ENST00000565735 1410 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 RNU5D-1-201ENST00000363299 116 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 ARF4P3-201ENST00000397387 509 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 PSMA2P3-201ENST00000429685 675 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 CKS1BP5-201ENST00000434172 273 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC084290.1-201ENST00000434995 374 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC007327.1-201ENST00000447461 264 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC013828.1-201ENST00000481845 158 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 GMPSP1-201ENST00000514075 579 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 ZNF705CP-201ENST00000530515 889 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 OR5D17P-201ENST00000531492 978 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 LSM6P2-201ENST00000552208 177 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 OR4H12P-201ENST00000556269 907 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 ZNF192P1-203ENST00000565888 810 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 ELOCP29-201ENST00000588193 334 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 BNIP3P26-201ENST00000600827 554 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AL390838.2-201ENST00000602394 274 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 HMGN2P28-201ENST00000606102 262 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC026790.2-201ENST00000606282 430 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC005332.6-201ENST00000613178 446 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AC008083.4-201ENST00000615076 444 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RNF41Q9H4P4 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 AF127577.6-201ENST00000623352 2191 ntBASIC3.31□□□□□ -1.88
RNF41Q9H4P4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 MTND5P3-201ENST00000438536 1800 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 RPL9P7-201ENST00000330965 580 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 RNU6-216P-201ENST00000363282 104 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 MIR506-201ENST00000384998 124 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AL355379.1-201ENST00000405542 640 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 VDAC1P3-201ENST00000434069 851 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC244505.4-201ENST00000434905 287 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC105272.1-201ENST00000438604 198 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 SSXP5-201ENST00000443473 287 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 TRBV26-201ENST00000456572 344 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC010301.1-201ENST00000473936 355 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC091826.1-201ENST00000514065 313 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AP001189.2-201ENST00000527320 189 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 MTCO2P15-201ENST00000532655 656 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AL132657.2-201ENST00000564417 358 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 CYCSP39-201ENST00000565821 309 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 LARP7P2-201ENST00000575306 125 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 MIR3605-201ENST00000583214 100 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC011471.1-201ENST00000585766 187 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.3□□□□□ -1.88
RNF41Q9H4P4 AC021749.1-201ENST00000604322 607 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms