Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC004865.1-201ENST00000442276 1003 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 OR51B8P-201ENST00000449892 769 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC233982.1-201ENST00000451247 436 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 RN7SL432P-201ENST00000484057 298 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 MTCO1P31-201ENST00000506355 492 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC087272.1-201ENST00000523624 533 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 SNRPGP16-201ENST00000533275 226 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC079089.3-201ENST00000603094 673 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AC022387.2-201ENST00000604050 448 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AL033523.1-201ENST00000605153 153 ntBASIC3.11□□□□□ -1.91
CHMP4BQ9H444 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CHMP4BQ9H444 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 U8.8-201ENST00000365399 135 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 SNORA51.12-201ENST00000384448 134 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 SSXP10-201ENST00000402595 565 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AL359511.1-201ENST00000402970 211 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC091390.3-201ENST00000426478 338 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC233279.1-201ENST00000455300 423 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AL135752.1-201ENST00000479477 471 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC004924.1-201ENST00000480160 781 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC096576.1-201ENST00000489014 359 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC008885.2-201ENST00000509506 930 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC025281.1-201ENST00000567026 265 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC090312.2-201ENST00000582687 378 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 CBX3P2-202ENST00000583365 535 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 AC006329.2-201ENST00000611491 394 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 MIR6895-201ENST00000613497 78 ntBASIC3.1□□□□□ -1.91
CHMP4BQ9H444 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP4BQ9H444 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP4BQ9H444 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHMP4BQ9H444 TATDN1P1-201ENST00000414123 891 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AL512504.1-201ENST00000415494 778 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.09□□□□□ -1.91
CHMP4BQ9H444 MRPS33P4-201ENST00000434892 317 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AL121871.1-201ENST00000443413 436 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP4BQ9H444 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP4BQ9H444 RNA5SP320-201ENST00000516263 124 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 RNA5SP471-201ENST00000516971 106 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AC087808.1-201ENST00000520501 361 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.09□□□□□ -1.91
CHMP4BQ9H444 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AMZ2P1-203ENST00000565833 850 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AC018618.2-201ENST00000604770 446 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 AP003485.2-201ENST00000623636 610 ntBASIC3.09□□□□□ -1.91
CHMP4BQ9H444 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
CHMP4BQ9H444 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CHMP4BQ9H444 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AL139276.1-201ENST00000311910 1001 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 RNU1-105P-201ENST00000363470 161 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AF274854.1-201ENST00000413236 615 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AL158825.1-201ENST00000414735 521 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AL356320.2-201ENST00000417263 507 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AL109933.2-201ENST00000452651 260 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 RPS27P27-201ENST00000498779 255 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 MLLT10P2-201ENST00000506434 249 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 RNA5SP24-201ENST00000516478 95 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 OR5AK3P-201ENST00000527486 1297 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 HMGB1P6-201ENST00000569046 646 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 MIR3609-201ENST00000582661 80 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 XIAPP1-201ENST00000603162 600 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC067747.1-201ENST00000608026 250 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC106028.5-201ENST00000610332 395 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 MIR6840-201ENST00000611937 71 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC025588.4-201ENST00000615802 908 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AL449363.1-201ENST00000617815 186 ntBASIC3.08□□□□□ -1.92
CHMP4BQ9H444 AC244517.1-201ENST00000606030 2086 ntBASIC3.07□□□□□ -1.92
CHMP4BQ9H444 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP4BQ9H444 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP4BQ9H444 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP4BQ9H444 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CHMP4BQ9H444 RNU6-1249P-201ENST00000363237 111 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms